Gene SeD_A0231 details

Gene Information

• Locus tag: SeD_A0231
• ID: 6872456
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853
• Kingdom: Bacteria
• Replicon accession: NC_011205
• Strand: -
• Start bp: 244939
• End bp: 247971
• Gene Length: 3033 bp
• Protein Length: 1010 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 642783477
• Product: viral enhancin protein
• Protein accession: YP_002214171
• Protein GI: 198246109

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 72
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACTCAGG AAATCACGCT AACATGTTAT TCGCTGCCTG CGGCCCCCGG ACTGGATAAC 
ATCAAATTTG AAAAGGGGCG CGAGCACGAC CGCCAGGCGC TGGGATTTAT TCTGCCAGCG 
AATACGCAGC TGCAAATCCG CCAGCCAAAT AACAACGCCG GTAACGCCAG ACTCCGTCTG 
CTGTGCAATG ACTCAGCGTG TGAGAAATCG CTTACGCTGA ACGGCAACTG GCAAACGATC 
AGCACAACGG TCGATTCCGT TCCCTTTATT GATACCCTCT TTTTTGCGCA GGGCGGCGAG 
TTTTCGGTGA TCTACCGACA GCCAACCAGC AATAAAAATT TGCCACACTG GCGTAAGGGG 
CAATCCGAAG ACGCTTTTTT CCAGACCTGG GAAGAACAGG CGTCGCCTTT TGCCCTACTG 
GAACTGGACC GCGTGCGTTT TCTGCTGCCC TGGGCGGATC GCGCTAATGT CATCAACGCC 
GGTATCACCG CGCTGGATGC GTACTACACG CGAGTGATCG ACGCCTATAA TGGCTGGACT 
GGTCTCAGCG ATAGCCCTGC TTCGCCGCTT AATCAAAATG TCGCTAACCG CTATTTTATT 
AAAGCGGATA AACACGGCGT CGGCGCGGCT TATTATCTCC CCTGGTGGTG CGCGCAAACG 
GCTGCAACAT TAAGCCAGGG GTGGATCGAT AATGTCGCCA CGCAGTGGAC GATTCTGCAT 
GAAATCGGTC ACGGCTATCA GGGCGTCTTT ATGAATGACG TCGACCTGCC AGTCGGTGAG 
GTGTGGAACA ACATTTACGC CGCGTTTTTC CAGCAGCTTA ACCTGAACCA GGGGAACCAT 
CTTTATACCG ACGGCTGGCT CTACAATTAC GGACGGCAGT CTGAGCAGGA ATTGCAATTC 
ATTACCTATC TGCGGAATCG CACGCCGGTT AACGCCTGGG GCGTCCGCCC CCGCCTGCAA 
TTTCTGATGC TGATGTTATT TAAAGGCGGA ACAGAAGCCT TTCGAGTGTT TAACCAGAAC 
TACCGCGAGC TGGGTGCTGA CGAAAACTTT TTGCCCTGCG AGCATCGCCT GACCGATCTG 
CTGGCGGACG CCATCGCCAC AGCCTCAGGT TATGACGTCG CGCCGTTTAT TCAGCTGTGC 
GGCTTACCGG TCGATGCGTT CACCCGCGAG CAGATCGCCG CACAGGCGGT AAAACCCGTC 
TGGCCGCTTT ACGATCTGTT GCCGGAGCGC GAATGGGAAA GCGCGCGCCA ACAGTTAGGG 
CTGGACTCTT TTGTCTGGCT GGTTGAAAAC GCCGAACTGG CGGAGCTGAA CAAAACGGGA 
ACGCTCACGC TAACGCTGAA TATCGATCAG CCGGAGCAAC TTTATGGACG CGCCTTAACG 
CTACACGACA ACGCCGGCAG CACGTATACA TTGCCCGTCA ACGACAGTAC GCTCACGTTA 
ACTCCCCTGC CCATTGGCAT TTACCATCTC ACCCTGCCCA AAGGGCGATC GCAGAAATAC 
CGCCCGGACA CGGACTATGT GGTTATCCGC GAAGGGGAAA ACGCACTTAC CGTTAATTTC 
ACCGCCTTGC AGGACAGCGC CGCGTATAAC GAGCAGTTGA TTTTCCTCGG CTACGGTGAC 
ATGCCCTTCG CCCGTTTAGC CGTGGATCAT GAGGCCAGAC AATTAGTTCT GGATATCACG 
AACGCCACGC CGCACAGCTA CTTCGCGAAT ACGTTATACG CCAGCATAAC GGTGTTAACC 
GCCAGCGGCG AAAAGGTTTT TGAACGTAAG ATGAACGGAA TAAACTGCGC CACCGGAAAA 
ATTGTGGTGC CGTTTAGCGA CCACTACCAC CTTTATCTTT ATCATGCCGA GCCTGGCCGC 
CTGAAAGCCT CGCCGGGCTA TCTGACATTG GTCTCGTCGA CGAAATATCA GTTACTGCGT 
CTTGATAGCG AAGGGCTTTA TCATTTTTCG CTCAACAACG ATCCTGCCGC AGATCTCCAG 
GCTATGTTTA CCCATCGCGC AGATGCTATC CGCGCCTGCC CTTTATTAAT GGCGCAACCT 
TATGCCGCTT GCAAAAACGA TCTCTGGCTG ATGCTCTCCC ATATTGAAGA GCCGACCCGT 
AGCGCGTTAA TGCGCGACAG CGTTGATGTG CTGCCGGCGG ATAACAGCGA GCCGGGCGAA 
GGCATCGGTA AAGGCGTGAC GTTGCAGTTA CGCGGACAAG GCGACAGAAC GTTTTGCCAG 
CTTGCTTACG ATAATCGGCA ACAGCGCATG ACAATAGAAA CACTGGCCGG GCAGCCTCAT 
CCCTACTATA CCGCGACATA CAGCACGCTC ACGGTAAAGG AGGAGTCCGG CGAGGTTATC 
TATAGCCGTC ATTATGATGG CATCACCCAC TATTCAGCCG ATAGCGATAC GGTTGTTTTG 
CAAGCGGGAA TGTACATTGA GCTCTTCCAT GACGAACCTT ACCGTTGCAG CGCCATCAAT 
GAAACGACCG GGCAAAACGT CAGGCTGAAA AAACACAACC GCTGGCGCGT GGTGAGCGAT 
GGGCTGGAGG TCGACTCACC GGAACAAACG GAAGAGAAAA ATACCTCCGA TGCTGCCGCA 
TTATATGGCG ATAAATTCAG CTGGCAGCTT ATTGGCAAGG AAGAAAATGG TTTTGCCAGT 
ATGGAAATAG ACATCCGTGC GCAACAATTT ATCTTTACCG CATACCCAAT TGCGCCGCAT 
AGCGACTTCG CAACGGAATA TGCGGCAGTG ACGATTTATA ATACGCGCGG TACGGTGGTT 
TACCGTCAGT CGATAAAAGG TTCGGTGCAG CTTGGCGGCT ATACTGACGT CTGCGGGCTG 
GATGAGGATT ATACGATTGA GGTCTTTCAT GCCGAGGGCG CAGACCAGTC GGTTATCCGC 
AACCCGCTCA ATGGCGAAAG CTGGCCGCAG CCGCAACACG TGATCTGGCA GGTCACGGCG 
CGGGGATTAC AGCGCCTGAC CACGAATTAC CCCCCCCATC ACAGCGTCTT CGGGCGCTGT 
GAGATTACGT TGTCGGATGG CGGCTTTGCC TAA 

 

Protein sequence

MTQEITLTCY SLPAAPGLDN IKFEKGREHD RQALGFILPA NTQLQIRQPN NNAGNARLRL 
LCNDSACEKS LTLNGNWQTI STTVDSVPFI DTLFFAQGGE FSVIYRQPTS NKNLPHWRKG 
QSEDAFFQTW EEQASPFALL ELDRVRFLLP WADRANVINA GITALDAYYT RVIDAYNGWT 
GLSDSPASPL NQNVANRYFI KADKHGVGAA YYLPWWCAQT AATLSQGWID NVATQWTILH 
EIGHGYQGVF MNDVDLPVGE VWNNIYAAFF QQLNLNQGNH LYTDGWLYNY GRQSEQELQF 
ITYLRNRTPV NAWGVRPRLQ FLMLMLFKGG TEAFRVFNQN YRELGADENF LPCEHRLTDL 
LADAIATASG YDVAPFIQLC GLPVDAFTRE QIAAQAVKPV WPLYDLLPER EWESARQQLG 
LDSFVWLVEN AELAELNKTG TLTLTLNIDQ PEQLYGRALT LHDNAGSTYT LPVNDSTLTL 
TPLPIGIYHL TLPKGRSQKY RPDTDYVVIR EGENALTVNF TALQDSAAYN EQLIFLGYGD 
MPFARLAVDH EARQLVLDIT NATPHSYFAN TLYASITVLT ASGEKVFERK MNGINCATGK 
IVVPFSDHYH LYLYHAEPGR LKASPGYLTL VSSTKYQLLR LDSEGLYHFS LNNDPAADLQ 
AMFTHRADAI RACPLLMAQP YAACKNDLWL MLSHIEEPTR SALMRDSVDV LPADNSEPGE 
GIGKGVTLQL RGQGDRTFCQ LAYDNRQQRM TIETLAGQPH PYYTATYSTL TVKEESGEVI 
YSRHYDGITH YSADSDTVVL QAGMYIELFH DEPYRCSAIN ETTGQNVRLK KHNRWRVVSD 
GLEVDSPEQT EEKNTSDAAA LYGDKFSWQL IGKEENGFAS MEIDIRAQQF IFTAYPIAPH 
SDFATEYAAV TIYNTRGTVV YRQSIKGSVQ LGGYTDVCGL DEDYTIEVFH AEGADQSVIR 
NPLNGESWPQ PQHVIWQVTA RGLQRLTTNY PPHHSVFGRC EITLSDGGFA