| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0229 |
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| Symbol | degP |
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| ID | 6871230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 242145 |
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| End bp | 243572 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642783475 |
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| Product | serine endoprotease |
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| Protein accession | YP_002214169 |
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| Protein GI | 198246202 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 80 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA CCACATTAGC AATGAGTGCA CTGGCTCTGA GTTTAGGTTT GGCATTGTCG
CCTCTGTCTG CCACGGCGGC TGAAACGTCC TCTTCAGCAA TGACTGCCCA GCAGATGCCA
AGCCTGGCAC CGATGCTCGA AAAAGTGATG CCATCGGTGG TCAGTATTAA TGTTGAAGGT
AGCACCACGG TGAATACGCC GCGTATGCCG CGTAATTTCC AGCAGTTCTT TGGCGATGAC
TCCCCGTTCT GCCAGGACGG TTCTCCGTTC CAGAATTCTC CGTTCTGCCA GGGCGGCGGT
AACGGCGGCA ACGGCGGTCA GCAACAGAAA TTCATGGCGC TGGGCTCCGG CGTAATTATT
GACGCCGCGA AGGGCTACGT CGTCACCAAC AACCACGTGG TTGATAACGC CAGCGTGATT
AAAGTACAGC TTAGCGATGG ACGTAAATTC GATGCTAAAG TGGTAGGCAA AGATCCGCGT
TCTGATATCG CGCTGATTCA AATTCAGAAT CCGAAGAACC TGACGGCGAT TAAGCTGGCG
GACTCCGACG CGCTGCGCGT GGGGGATTAT ACCGTCGCTA TTGGTAACCC GTTTGGTCTG
GGCGAAACGG TGACGTCAGG TATCGTTTCG GCGCTGGGGC GTAGCGGCCT GAACGTAGAA
AATTACGAGA ATTTTATTCA GACCGACGCC GCGATTAACC GCGGTAACTC CGGCGGCGCG
CTGGTGAACC TGAACGGTGA GCTGATCGGT ATTAACACCG CGATTCTGGC GCCGGACGGC
GGCAACATCG GTATCGGCTT CGCTATCCCC AGTAACATGG TGAAAAACCT GACGTCGCAG
ATGGTGGAAT ACGGCCAGGT GAAACGCGGC GAACTGGGGA TCATGGGGAC TGAGCTGAAT
TCCGAATTGG CGAAAGCGAT GAAAGTCGAC GCCCAGCGTG GCGCGTTCGT CAGCCAGGTG
ATGCCGAATT CGTCCGCGGC GAAAGCGGGT ATCAAAGCCG GGGATGTCAT TACCTCGCTG
AACGGTAAAC CGATCAGCAG CTTTGCGGCG CTGCGCGCTC AGGTCGGCAC TATGCCGGTC
GGCAGCAAAA TCAGCCTCGG TCTGCTGCGT GAAGGTAAAG CGATTACGGT TAATCTGGAA
CTGCAGCAGA GCAGCCAGAG TCAGGTTGAT TCCAGCACCA TCTTCAGCGG GATTGAAGGC
GCTGAAATGA GCAATAAAGG CCAGGATAAA GGCGTTGTGG TGAGCAGCGT GAAAGCGAAC
TCACCCGCCG CGCAAATTGG CCTCAAAAAA GGCGATGTGA TTATCGGCGC TAACCAGCAG
CCGGTGAAAA ATATCGCCGA GCTGCGTAAG ATTCTCGACA GCAAGCCGTC GGTACTGGCG
CTGAATATTC AGCGTGGTGA TAGTTCTATT TATTTGCTGA TGCAGTAA
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| Protein sequence | MKKTTLAMSA LALSLGLALS PLSATAAETS SSAMTAQQMP SLAPMLEKVM PSVVSINVEG
STTVNTPRMP RNFQQFFGDD SPFCQDGSPF QNSPFCQGGG NGGNGGQQQK FMALGSGVII
DAAKGYVVTN NHVVDNASVI KVQLSDGRKF DAKVVGKDPR SDIALIQIQN PKNLTAIKLA
DSDALRVGDY TVAIGNPFGL GETVTSGIVS ALGRSGLNVE NYENFIQTDA AINRGNSGGA
LVNLNGELIG INTAILAPDG GNIGIGFAIP SNMVKNLTSQ MVEYGQVKRG ELGIMGTELN
SELAKAMKVD AQRGAFVSQV MPNSSAAKAG IKAGDVITSL NGKPISSFAA LRAQVGTMPV
GSKISLGLLR EGKAITVNLE LQQSSQSQVD SSTIFSGIEG AEMSNKGQDK GVVVSSVKAN
SPAAQIGLKK GDVIIGANQQ PVKNIAELRK ILDSKPSVLA LNIQRGDSSI YLLMQ
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