Gene SeD_A0226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0226 
Symbol 
ID6873021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp238922 
End bp239710 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content56% 
IMG OID642783472 
Productvitamin B12-transporter protein BtuF 
Protein accessionYP_002214166 
Protein GI198243001 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGGG CGCTGGTCGC CCTGCTGCTT ACGCTCCCGG TGTGGCTTTA CGCTGCGCCG 
CGCGTCATTA CCCTCTCTCC CGCCAATACG GAGCTCGCTT TTGCCGCCGG GATTACGCCC
GTTGGCGTCA GCAGCTATTC CGACTACCCG CCCGAAGCGC AAAAAATAGA ACAGGTCTCT
ACCTGGCAGG GAATGAATCT GGAACGCATT GTGGCGCTGA AGCCGGATCT GGTCGTCGCC
TGGCGCGGCG GTAATGCGGA ACGCCAGGTA AACCAACTGA CGTCATTAGG TATTAAGGTC
ATGTGGGTGG ACGCGGTAAG CATCGAACAG ATCGCCGACA CGCTCCGTCA ACTGGCCGCC
TGGAGCCCGC AGCCGGAAAA GGCTCAGCAG GCAGCGCAGA CATTGCTAAA CGAGTACGCC
GCGCTCAACG CCGAGTATGC CGGTAAAGCT AAAAAGCGCG TCTTTCTTCA GTTTGGCATG
AATCCTCTGT TTACCAGTGG TAAAGGGTCT ATTCAACATC AGGTTTTGAC GACCTGCGGC
GGAGAAAACG TCTTTGCTGA CAGCCGCGTG CCGTGGCCGC AAGTCAGCCG TGAACAGGTG
CTGGCAAGGC ATCCCCAGGC CATTATCGTG GCCGGAAAAG CGGGCGAAAT TCTCAAAATT
GAACAATACT GGGGAAACCT GTTAAAAATT CCGGTTATTC CGCTTAACAG CGACTGGTTT
GAACGCGCAA GCCCGCGTAT TATCCTCGCC GCAAAACAAC TCTGTAATGC GCTTTCACAG
GTGAATTAG
 
Protein sequence
MFRALVALLL TLPVWLYAAP RVITLSPANT ELAFAAGITP VGVSSYSDYP PEAQKIEQVS 
TWQGMNLERI VALKPDLVVA WRGGNAERQV NQLTSLGIKV MWVDAVSIEQ IADTLRQLAA
WSPQPEKAQQ AAQTLLNEYA ALNAEYAGKA KKRVFLQFGM NPLFTSGKGS IQHQVLTTCG
GENVFADSRV PWPQVSREQV LARHPQAIIV AGKAGEILKI EQYWGNLLKI PVIPLNSDWF
ERASPRIILA AKQLCNALSQ VN