Gene SeD_A0225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0225 
Symbol 
ID6872261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp238262 
End bp238885 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content57% 
IMG OID642783471 
Producthypothetical protein 
Protein accessionYP_002214165 
Protein GI198243681 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGTCT ATTGGCTGGA TATTGTAGGC ACGGCTGTAT TTGCTATCTC TGGCGTGTTG 
CTGGCCGGGA AATTACGTAT GGATCCGTTC GGCGTCCTAG TGCTCGGCGT CGTTACTGCC 
GTTGGCGGCG GGACAATCCG CGATATGGCG CTGGATAACG GCCCGGTATT CTGGGTTAAA 
GATCCTACCG ACCTGGTCGT CGCCATGGTC ACCAGTATGC TGACCATCCT GCTGGTTCGC 
CAGCCAAGAC GTCTGCCGAA ATGGATGTTG CCGGTGCTGG ATGCGGTCGG GCTGGCGGTG 
TTTGTCGGCA TTGGGGTGAA TAAAGCCTTC CTCGCTGAAA CGGGGCCATT AGTGGCCGTC 
TGTATGGGCG TGATTACCGG CGTCGGCGGC GGGATTATTC GCGATGTTCT GGCACGCGAG 
ATCCCCATGA TCCTACGCAC CGAAATCTAT GCCACGGCCT GTATTATCGG CGGGATTGTT 
CACGCCACCG CGTTTTATAC GTTTTCAGTA CCGCTGGAAA GCGCCAGCAT GATGGGTATG 
GTCGTCACGC TGTTCATTCG GCTGGCGGCC ATTCGCTGGC ATTTGAAATT GCCGACGTTT 
GCCCTGGATG AAAACGGACG TTGA
 
Protein sequence
MLVYWLDIVG TAVFAISGVL LAGKLRMDPF GVLVLGVVTA VGGGTIRDMA LDNGPVFWVK 
DPTDLVVAMV TSMLTILLVR QPRRLPKWML PVLDAVGLAV FVGIGVNKAF LAETGPLVAV 
CMGVITGVGG GIIRDVLARE IPMILRTEIY ATACIIGGIV HATAFYTFSV PLESASMMGM 
VVTLFIRLAA IRWHLKLPTF ALDENGR