Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0221 |
Symbol | hemL |
ID | 6871923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 234864 |
End bp | 236144 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642783468 |
Product | glutamate-1-semialdehyde aminotransferase |
Protein accession | YP_002214162 |
Protein GI | 198244305 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
TIGRFAM ID | [TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00426685 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTAAGT CTGAAAATCT CTATAGCGCG GCCCGCGAGC TGATCCCCGG CGGCGTGAAC TCCCCTGTTC GCGCCTTCAC TGGCGTGGGC GGCACCCCGC TGTTTATCGA AAAAGCGGAC GGCGCGTATC TGTACGATGT CGATGGCAAA GCGTATATCG ACTATGTCGG TTCCTGGGGA CCAATGGTAC TGGGGCATAA CCATCCGGCT ATCCGCAATG CGGTGATCGA AGCTGCGGAG CGCGGTTTAA GCTTCGGCGC GCCAACCGAA ATGGAAGTGA AAATGGCGGA ACTGGTCACC AACCTGGTGC CGACCATGGA CATGGTGCGC ATGGTGAACT CCGGCACCGA AGCGACCATG AGCGCTATTC GCCTGGCGCG TGGTTTTACT GGCCGCGATA AGATTATCAA ATTCGAAGGC TGCTACCACG GCCACGCAGA CTGCCTGCTG GTCAAAGCCG GTTCTGGCGC GCTGACGCTC GGTCAGCCGA ACTCGCCGGG CGTGCCGGCA GATTTCGCGA AACATACGCT GACCTGCACT TATAACGATC TGGCGTCAGT ACGCGCGGCG TTTGAACAAT ATCCGCAGGA AATCGCCTGT ATCATCGTCG AACCCGTAGC GGGCAATATG AACTGCGTCC CGCCGCTGCC GGAATTTCTG CCAGGTCTGC GCGCCTTGTG CGATGAGTTC GGCGCGCTGC TGATTATCGA CGAAGTGATG ACCGGTTTTC GCGTAGCGCT GGCCGGAGCC CAGGATTACT ACGGCGTCGT GCCGGACCTG ACCTGTCTGG GTAAAATCAT CGGCGGCGGG ATGCCGGTAG GCGCGTTTGG CGGTCGTCGC GATGTAATGG ATGCGCTGGC GCCGACGGGC CCGGTTTACC AGGCGGGCAC CCTTTCCGGC AACCCGATTG CGATGGCGGC CGGTTTCGCC TGCCTGAATG AAGTCGCCCA GCCCGGCATT CATGAAACGC TGGATGAGCT CACCACCCGT CTGGCGGAAG GTTTGCTGGA AGCTGCCGAA GAAGCGAATA TTCCGCTGGT GGTTAACCAT GTCGGCGGCA TGTTCGGGAT TTTCTTCACC GACGCTGAGA GCGTAACCTG CTATCAGGAC GTGATGGCGT GCGACGTGGA ACGCTTTAAG CGTTTCTTCC ACCTGATGCT GGAGGAAGGC GTGTATCTGG CGCCATCGGC GTTTGAGGCG GGCTTTATGT CGGTCGCACA CAGCATGGAC GACATTAATA ATACTATTGA CGCCGCGCGT CGGGTGTTTG CGAAACTGTA A
|
Protein sequence | MSKSENLYSA ARELIPGGVN SPVRAFTGVG GTPLFIEKAD GAYLYDVDGK AYIDYVGSWG PMVLGHNHPA IRNAVIEAAE RGLSFGAPTE MEVKMAELVT NLVPTMDMVR MVNSGTEATM SAIRLARGFT GRDKIIKFEG CYHGHADCLL VKAGSGALTL GQPNSPGVPA DFAKHTLTCT YNDLASVRAA FEQYPQEIAC IIVEPVAGNM NCVPPLPEFL PGLRALCDEF GALLIIDEVM TGFRVALAGA QDYYGVVPDL TCLGKIIGGG MPVGAFGGRR DVMDALAPTG PVYQAGTLSG NPIAMAAGFA CLNEVAQPGI HETLDELTTR LAEGLLEAAE EANIPLVVNH VGGMFGIFFT DAESVTCYQD VMACDVERFK RFFHLMLEEG VYLAPSAFEA GFMSVAHSMD DINNTIDAAR RVFAKL
|
| |