Gene SeD_A0218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0218 
Symbol 
ID6871035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp232911 
End bp233387 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content48% 
IMG OID642783465 
Productfimbrial subunit 
Protein accessionYP_002214159 
Protein GI198242324 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000705138 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones87 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TAGTTTTGAC GATGTTAATG GGGGGCAGCC TTGCCGCACA GGCAGCCGAT 
AATCTTAAGT TTCACGGCAC ATTAATTTCA CCGCCGAATT GTACGATTAA CAATGATCAG
ACGATCGACG TTAAGTTCGG TAACCTGCTG ATTAATAAAA TAGATGGTAC GCGTTATGCG
CAGAATGTTC CGTATGAGAT CACCTGTGAT TCAACGGTGC GCGATGAGAC GATGGCGATG
ACCCTGACGC TAAGCGGTTC CGTGAGTGAT TTTAATCCGG CGGCGGTAAA CACCAGCGTG
GCGGGGCTGG GGATTGAACT CAGGCAGAAC GACCAACCCT TTACGTTGGG GTCCACCATT
ACGGTGAATG AACAATCGAT ACCTGTTCTG AAAGCCATAC CGGTTAAAAA GAGCGGTGCT
TCGCTGAAAG AAGGCGGCTT CGATGCGACG GCAACATTAC AGGTGGATTA TCAGTAA
 
Protein sequence
MKKIVLTMLM GGSLAAQAAD NLKFHGTLIS PPNCTINNDQ TIDVKFGNLL INKIDGTRYA 
QNVPYEITCD STVRDETMAM TLTLSGSVSD FNPAAVNTSV AGLGIELRQN DQPFTLGSTI
TVNEQSIPVL KAIPVKKSGA SLKEGGFDAT ATLQVDYQ