| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0217 |
|---|
| Symbol | |
|---|
| ID | 6874967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | + |
|---|
| Start bp | 232402 |
|---|
| End bp | 232914 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642783464 |
|---|
| Product | putative minor fimbrial subunit |
|---|
| Protein accession | YP_002214158 |
|---|
| Protein GI | 198241827 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000836634 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 86 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCAAT GGCGGTTACG GCTGGGCACG GTAACGTGTG CGGCCATGCT GAGTGCGGTC
AGTATGCCGC TGGCAGCGGG AAGTAAGACG GTCAACATGA CGCTGACGAT AGTCGTTAAT
GCCGCGCCGC CCTGTACTGT GACCGGCGGT GAGGTGGAAT TTGGCAATGT GTTGACGACG
AAAGTGGATG GGGTGAATTA CCGGCAGGCG GTGGGCTATC GCCTGAGCTG TAACGGCAGA
GTGAGCGATT ACCTGAAGTT ACAGATTCAG GGGAATGCGG TGACTATCAA TGGCGAGTCG
GTATTGCAAA CCGATGTCGA TGGATTGGGT ATCCGTCTGC AAACCACCAC GGATGGCGCG
CTGATTTCAC CCGGCAATAC GCAATGGTTG TCATTTCAAT ACAGCGGCGG CAGCGGTCCG
GCCATTGAGG CGATTCCCGT CAAAAATAAT GGCGTAACGT TAACAGGTGG CGCGTTTAAC
GCAGGCGCCA CGTTGGTGGT GGATTACCAA TGA
|
|---|
| Protein sequence | MRQWRLRLGT VTCAAMLSAV SMPLAAGSKT VNMTLTIVVN AAPPCTVTGG EVEFGNVLTT
KVDGVNYRQA VGYRLSCNGR VSDYLKLQIQ GNAVTINGES VLQTDVDGLG IRLQTTTDGA
LISPGNTQWL SFQYSGGSGP AIEAIPVKNN GVTLTGGAFN AGATLVVDYQ
|
|---|
| |