Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0214 |
Symbol | |
ID | 6875501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 228310 |
End bp | 228870 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642783461 |
Product | putative fimbrial subunit |
Protein accession | YP_002214155 |
Protein GI | 198244279 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.699592 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 87 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACAG CAGTAAAAGC TGCGGTTGCT GCCGCACTGG TTATGGGTGT TTCCAGCTTT GCCAATGCTG CAGGCAGTAA TACTGGTACG GTTACTTTTA CCGGTACTAT TGAAGATTCA CCGTGTTCAA TCGTGGTTGG CGACGAACAC CAGACCGTTA ACCTGGGCCA TATCGGTACC GGTTCTCTGA TGGGCGGTAA AGAATCTTCA AAAGTCGATT TCCATATCGG TCTGGAAAAC TGCGCATTCA CCACTGAGAA AGAAGCGTCT ACCGTTTTCT CTGCCATCGG TAACGAATCC AGCGCTAATC CGGGCAGCGT TGCGCTGATG CGTATCGGCG GCGGCGAAAT GGCGGGTTCC AGCATTGTCA TCGGCAACCA CCTGGGTTCC GCGATCAAAT TGGGCGACGC TTACAGCGAA AATCTGACGA TGAACGGCAG CGTTGCGGCG GCGAAACAGA CTCTTAACTT CAAAGCCTGG GTGAAAGGCG ATTCCGCTGC CAGCACTATC GATACCGGCG AATTCAGCAG CACCGTAAAC TTCACGATCA GCTATCTGTA A
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Protein sequence | MNTAVKAAVA AALVMGVSSF ANAAGSNTGT VTFTGTIEDS PCSIVVGDEH QTVNLGHIGT GSLMGGKESS KVDFHIGLEN CAFTTEKEAS TVFSAIGNES SANPGSVALM RIGGGEMAGS SIVIGNHLGS AIKLGDAYSE NLTMNGSVAA AKQTLNFKAW VKGDSAASTI DTGEFSSTVN FTISYL
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