Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0211 |
Symbol | |
ID | 6874525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 225313 |
End bp | 227370 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642783458 |
Product | iron-hydroxamate transporter permease subunit |
Protein accession | YP_002214152 |
Protein GI | 198244879 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.460893 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 85 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCAGAA AACGTGAAAT GCCGGATGGC GGCGCGAAAA GCGTCTTATC CGACCTACGG TTCGGGCGCT TTGTAGGCCG GATAAGGCGA AGCCGCCATC CGGCGTTGCT GTTATTGGCG CTGTTTGTTG CCGCCTGCTG GCTGACATGG GTTAACTTCT CCGTTGCGCT ACCGCGCAGC CAGTGGCAAC AGGCTATCTG GTCACCGGAT ATCGACATCA TTGAGCAGAT GATTTTTCAT TACAGCCAGC TGCCAAGACT GGCGATTTCG CTGCTGGTGG GCGCGGGGCT TGGGCTGGTA GGCGTCCTGT TCCAGCAAGT ATTACGTAAC CCGCTGGCGG AACCGACCAC GCTGGGCGTG GCGACCGGCG CGCAATTGGG GATCACGGTG ACTACGCTTT GGGCGATTCC CGGCGCGCTG ACCACGCAGT TTGCCGCCCT GACGGGAGCC TGCATCGTCG GCGCGCTGGT GTTCGGCGTG GCGTGGGGCA AACGCCTGTC GCCAGTGACC CTGATCCTCG CCGGGCTGGT GGTCAGCCTC TATTGTGGCG CAATCAACCA GTTACTGGTG ATTTTCCACC ACGATCAGTT GCAAAGCATG TTTTTATGGA GCACCGGAAC GCTAACGCAA ACCGACTGGA GCGGCGTGCA GCGTCTGTGG CCGCAGTTGC TGGGCGGTGT GATGCTCACA TTATTGTTGC TACGTCCGAT GACGCTGATG GGGCTGGATG ACGGCGTTGC GCGTAATCTG GGTCTGGCGC TGTCGTTAGC GCGTCTGGCG GCGCTGTCGC TGGCGATTGT GTTGAGCGCG CTGCTGGTCA ACGCGGTGGG CATTATCGGT TTTATCGGCC TGTTTGCGCC GCTGCTGGCG AAAATGCTTG GCGCAAGACG TCTGCTGGCG CGCCTGATGC TGGCGCCGCT CATTGGGGCG CTTATTTTGT GGCTATCCGA TCAGATTATC CTTTGGCTAA CCCGCGTATG GATGGAGGTT TCCACCGGGT CAGTGACGGC GTTAATCGGC GCGCCGCTGC TCCTGTGGCT GCTGCCGCGG CTTAAAAGCA TGAGCGCGCC GGATATGAAC GCCAGCGATC GTGTGGCGGC GGAACGTCGG CACGTTCTTG CTTTTGCCGT TGCCGGTGGC GCGCTCCTGC TGCTGGCAAC ATGGGGCGCG CTCTCTTTTG GTCGCGACGC GCACGGCTGG ACGTGGGCGA GCGGAACGCT GCTTGAAGAA CTGATGCCGT GGCGCTGGCC GCGGATACTG GCGGCGTTAA TGGCGGGCGT CATGCTGGCG GTGGCGGGCT GCATTATTCA GCGTCTGACC GGTAATCCAA TGGCCAGTCC GGAAGTGCTG GGGATCAGTT CCGGAGCCGC GTTTGGCGTG GTGTTGATGC TGTTTTTGGT GCCGGGGAAT GCTTTCGGTT GGCTACTGCC TGCCGGAAGC CTGGGCGCGG CGGCGACACT GCTGATTATT ATGTTAGCCG CCGGGCGCGG CGGTTTCTCG CCGCAACGGA TGTTGCTGGC GGGGATGGCG CTCAGCACCG CGTTTACCAT GCTGCTAATG ATGCTCCAGG CGAGCGGCGA CCCGCGGATG GCGGAAGTGT TGACCTGGAT CGCAGGATCT ACCTATAACG CCACTGGCGG GCAGGTTACG CGAACCGCGA TCGTGATGGT GATTTTGCTG GCCATTGTGC CGTTGTGTCG CCGCTGGTTA ACGATTTTGC CACTGGGCGG CGATGCCGCG CGCGCGGTGG GCATGGCGCT TACGCCGTCG CGTATCGCGC TGCTGGCGCT GGCGGCGTGT TTGACGGCAA CCGCGACGAT GACCATTGGG CCGCTGAGTT TCGTTGGACT GATGGCGCCG CATATTGCGC GGATGCTCGG TTTTCGCCGG ACGATGCCGC ATATGGTCAT CTCGGCGCTG GCAGGGGGCG TTTTACTGGT CTTTGCCGAC TGGTGCGGCA GGATGGCGCT ATTTCCGTAT CAGATCCCGG CGGGACTGCT TTCAAGCTTT ATTGGCGCGC CGTATTTTAT CTATTTGCTA CGTAAACAGA GCCGGTAA
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Protein sequence | MSRKREMPDG GAKSVLSDLR FGRFVGRIRR SRHPALLLLA LFVAACWLTW VNFSVALPRS QWQQAIWSPD IDIIEQMIFH YSQLPRLAIS LLVGAGLGLV GVLFQQVLRN PLAEPTTLGV ATGAQLGITV TTLWAIPGAL TTQFAALTGA CIVGALVFGV AWGKRLSPVT LILAGLVVSL YCGAINQLLV IFHHDQLQSM FLWSTGTLTQ TDWSGVQRLW PQLLGGVMLT LLLLRPMTLM GLDDGVARNL GLALSLARLA ALSLAIVLSA LLVNAVGIIG FIGLFAPLLA KMLGARRLLA RLMLAPLIGA LILWLSDQII LWLTRVWMEV STGSVTALIG APLLLWLLPR LKSMSAPDMN ASDRVAAERR HVLAFAVAGG ALLLLATWGA LSFGRDAHGW TWASGTLLEE LMPWRWPRIL AALMAGVMLA VAGCIIQRLT GNPMASPEVL GISSGAAFGV VLMLFLVPGN AFGWLLPAGS LGAAATLLII MLAAGRGGFS PQRMLLAGMA LSTAFTMLLM MLQASGDPRM AEVLTWIAGS TYNATGGQVT RTAIVMVILL AIVPLCRRWL TILPLGGDAA RAVGMALTPS RIALLALAAC LTATATMTIG PLSFVGLMAP HIARMLGFRR TMPHMVISAL AGGVLLVFAD WCGRMALFPY QIPAGLLSSF IGAPYFIYLL RKQSR
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