| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0197 |
|---|
| Symbol | panC |
|---|
| ID | 6871974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 209158 |
|---|
| End bp | 210012 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642783444 |
|---|
| Product | pantoate--beta-alanine ligase |
|---|
| Protein accession | YP_002214138 |
|---|
| Protein GI | 198243382 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0414] Panthothenate synthetase |
|---|
| TIGRFAM ID | [TIGR00018] pantoate--beta-alanine ligase
[TIGR00125] cytidyltransferase-related domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.742862 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 77 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTAATCA TTGAAACCCT GCCGCTGCTG CGCCAGCATA TTCGTCGTCT GCGTCAGGAA
GGTAAACGCG TCGCACTGGT TCCCACCATG GGCAACCTGC ACGACGGCCA TATGAAGCTG
GTCGATGAGG CAAAAGCCCG GGCTGATGTG GTGATCGTCA GCATTTTCGT CAACCCGATG
CAGTTTGACC GGCCGGACGA TCTGGTGCGT TATCCGCGCA CGCTGCAGGA AGATTGTGAA
AAGCTGAACA AACGCAAAGT CGATTATGTC TTTGCGCCAG CCGTTGAGGA AATCTACCCG
CAGGGGCTGG AAGGCCAAAC GTACGTTGAT GTTCCCGGCC TCTCTACCAT GCTGGAAGGC
GCCAGCCGTC CGGGTCATTT CCGCGGCGTC TCGACCATCG TCAGCAAGCT GTTCAACCTG
ATCCAGCCGG ATATCGCCTG CTTTGGCGAG AAGGATTTCC AGCAACTGGC GCTGATCCGC
AAAATGGTGG CGGATATGAG TTATGACATT GAGATCGTCG GCGTGCCGAT TATTCGCGCT
AAAGACGGTC TGGCGCTCAG CTCACGTAAC GCTTATCTGA CCGCAGAGCA GCGCAAAATT
GCGCCGGGTC TATACAACGT GATGAATAGC ATCGCTGAAA AACTGATTGC GGGTAATCGT
GAGCTGCAAG AGATTATTGC CATTGCCGAA CAGGAACTGA ATGAAAAAGG CTTCCGTGCC
GACGACATTC AAATCCGTGA TGCCGACACG CTGCAGGAGC TGACGGAAAC CAGCAAACGC
GCAGTGATTC TGGCCGCCGC CTGGCTGGGT CAGGCGCGTC TGATCGATAA TCAAAGCGTT
ACATTAGCCC AGTAG
|
|---|
| Protein sequence | MLIIETLPLL RQHIRRLRQE GKRVALVPTM GNLHDGHMKL VDEAKARADV VIVSIFVNPM
QFDRPDDLVR YPRTLQEDCE KLNKRKVDYV FAPAVEEIYP QGLEGQTYVD VPGLSTMLEG
ASRPGHFRGV STIVSKLFNL IQPDIACFGE KDFQQLALIR KMVADMSYDI EIVGVPIIRA
KDGLALSSRN AYLTAEQRKI APGLYNVMNS IAEKLIAGNR ELQEIIAIAE QELNEKGFRA
DDIQIRDADT LQELTETSKR AVILAAAWLG QARLIDNQSV TLAQ
|
|---|
| |