| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0195 |
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| Symbol | |
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| ID | 6874247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 207453 |
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| End bp | 208676 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642783442 |
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| Product | polysaccharide deacetylase domain-containing protein |
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| Protein accession | YP_002214136 |
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| Protein GI | 198245891 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTTG TTCTTATCTT GCTGTTCTTT TTCGCCGGTA ATGTGTTGGC TGCCTTGCCC
GCTCGTTATA TGCAAACGAC GAAAGATGCC GCCATCTGGT CGCAGATTGG CGACAAAATG
GTGACCGTAG GGAATATCCG CGCCGGACAA ATTCTTTCCG TAACGCCTGT TGCGGCTGAT
TATTATGCCT TTAAATTCGG CTTCGGTGTG GGCTTTATCG ATAAAGGCCA TCTGGAATCC
GTGCAGGGAA AACAAAAAGT GGAAGATGGC CTGGGCGATC TTAACAAGCC GCTCAGCAAT
CAGAATCTGG TGACCTGGAA GGACACGCCG GTGTATAACG CGCCGGACAT CAGTAGCGCC
CCGTTTGGCG TATTGGTGGA TAATTTGCGT TACCCCATTA TTAGCAAGCT GAAAGGCCGG
CTACATCAAA CCTGGTATCA GATCCGTATT GGCGACAGGC TGGCTTATGT CAGCGCCATG
GATGCGCAGG AAGACAACGG CATTCCGATT TTGACCTATC ATCACATCTT ACGTGATGAA
GAGAATACTC GTTTTCGCCA TACGTCCACC ACGACTTCGG TTCGGGCATT CAGCAACCAA
ATGACCTGGC TTCGCGATCG CGGCTATGCC ACGTTGACGA TGTACCAACT GGAGGATTAC
ATCTATAACC GCGCTAATTT CCCGGCGCGC GCGGTGGCTA TCACCTTTGA TGATGGCCTT
AAATCGGTGA GTCGCTATGC GTATCCGGTA TTAAAGCAGT ACGATATGAA AGCGACGGCA
TTTATTATCT CATCGCGTAT TAAGCGCCAT CCGCAAAAAT GGAATCCCAG GTCGCTGCAA
TTTATGAGCG TGTCCGAATT GCGCAAGATA AGCGATGTTT TTGATTTTCA GTCGCATACC
CATTTTTTAC ACCGGGTAGA CGGGCATCGC CGCCCGATTT TATATAGCCG CAGCTACCAT
AATATTCTGT TTGATTTTGA ACGTTCGCGG AGGGCGCTCA CACAGTTTAC TCCGCACGTA
TTTTATCTTT CTTATCCCTT TGGCGGCTAT AACGCGACCG CGATCAAAGC AGCAAAAGAC
GCCGGTTTCC ATCTGGCGGT CACCACGGTG AGAGGGAAGG TGAAGCCGGG AGATAATCCG
ATGCTGCTCA AAAGGCTGTA TATTTTACGC ACGGATTCGC TGGAAACGAT GTCGCGGCTG
ATCAGCAACC AGCCGCAGGG ATAA
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| Protein sequence | MRVVLILLFF FAGNVLAALP ARYMQTTKDA AIWSQIGDKM VTVGNIRAGQ ILSVTPVAAD
YYAFKFGFGV GFIDKGHLES VQGKQKVEDG LGDLNKPLSN QNLVTWKDTP VYNAPDISSA
PFGVLVDNLR YPIISKLKGR LHQTWYQIRI GDRLAYVSAM DAQEDNGIPI LTYHHILRDE
ENTRFRHTST TTSVRAFSNQ MTWLRDRGYA TLTMYQLEDY IYNRANFPAR AVAITFDDGL
KSVSRYAYPV LKQYDMKATA FIISSRIKRH PQKWNPRSLQ FMSVSELRKI SDVFDFQSHT
HFLHRVDGHR RPILYSRSYH NILFDFERSR RALTQFTPHV FYLSYPFGGY NATAIKAAKD
AGFHLAVTTV RGKVKPGDNP MLLKRLYILR TDSLETMSRL ISNQPQG
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