Gene SeD_A0194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0194 
Symbol 
ID6873419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp206945 
End bp207385 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content51% 
IMG OID642783441 
ProductPTS system transporter subunit IIA 
Protein accessionYP_002214135 
Protein GI198244834 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGGAT GGGTCATTTC CTGTCATGAC GATCGGGCGC AGGAAATGCT CGAAGGTCTT 
GAAAAGAAGT ATGGGCCGTT GGCGCAGTGT CGGGCGGTCA ATTTCTGGCG TGGGTTAAGC
GTAAATATGC TCAGCCGCAT GATGTGTGAC GCCCTCCATG CCACCGACTC CGGTGAAGGC
GTGATATTTT TAACCGACAT TTCCGGCGCG GCGCCTTATC GTGTAGCGTC GCTGATGAGC
CATAAACATT CTCAATGTGA AGTTATTTCC GGTGTTAGCT ATTCATTGAT GGAGGAAATG
ATTACTTGGC GAGAGTCAAT GAGCAGTTCA GCATTTCGCG ACCAGATTGT CGCGCTTGGC
GCGCCGGATG TCACCAGTCT CTGGCATCAG CAGCAGAAAA ATCCGCCTTT TGTATTGCTG
CATGATTCGT ATGAGTTTTG A
 
Protein sequence
MLGWVISCHD DRAQEMLEGL EKKYGPLAQC RAVNFWRGLS VNMLSRMMCD ALHATDSGEG 
VIFLTDISGA APYRVASLMS HKHSQCEVIS GVSYSLMEEM ITWRESMSSS AFRDQIVALG
APDVTSLWHQ QQKNPPFVLL HDSYEF