Gene SeD_A0192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0192 
Symbol 
ID6872715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp206036 
End bp206575 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content53% 
IMG OID642783439 
Productputative fimbrial subunit 
Protein accessionYP_002214133 
Protein GI198243893 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCT CCTTAAAAAC ACTCACTGTG GCACTGGCCG CCATCACCCT CTCCCCCGCC 
GCGCTGGCAG ACACCGCCAA AGACGGCACC GTACATATCA CCGGCCTCAT TAAGCAAAAC
GCCTGTACGG TAAAAACGGA TTCAGTAGAG GTGACATTAC AGGAAGAATT TGCCTCTCTT
TTCACTGCCG CAGGGCAGAC GGCAGGGGAT ACAGACTTCA CCATCGAACT CGAAAACTGC
GACGCAAACG TCTACAGCAG TGTACAGGCG CGCTTTGAAG GCACACTCGA CGGAACCGAT
GCGACCATCC TGAAAAATGA GGATGATGCT GAGAATATTG GCGTGCAAAT TCTTGATAAA
ACTAGCACCC CTATGACCTT TAACGATCTT CAGGCATGGT CTGCCGCAGT CGCGCTCCCT
ACAGCAGAGG GGGTGACGGA ACTCTCAATG CCTTTCACCG CCCGCTATAT CGCCACCGCG
GTTCCCGTTA AGTCGGGAAC GGTCGATGCA ACTGCAACAT TCTATCTGCA ATATAACTGA
 
Protein sequence
MKLSLKTLTV ALAAITLSPA ALADTAKDGT VHITGLIKQN ACTVKTDSVE VTLQEEFASL 
FTAAGQTAGD TDFTIELENC DANVYSSVQA RFEGTLDGTD ATILKNEDDA ENIGVQILDK
TSTPMTFNDL QAWSAAVALP TAEGVTELSM PFTARYIATA VPVKSGTVDA TATFYLQYN