Gene SeD_A0183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0183 
Symbol 
ID6872399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp194182 
End bp195792 
Gene Length1611 bp 
Protein Length536 aa 
Translation table11 
GC content56% 
IMG OID642783430 
Productmulticopper oxidase 
Protein accessionYP_002214124 
Protein GI198243647 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2132] Putative multicopper oxidases 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACGCC GTGATTTCTT AAAATATTCA GTGGCGCTGG GGGTTGCATC AGCGCTGCCG 
CTGTGGAGCC GCGCCGCTTT TGCCGCCGAA CGTCCCGCGT TGCCTATTCC TGACCTGTTA
ACGGCAGATG CGAGCAACCG TATGCAGTTA ATTGTTAAAG CCGGACAGTC GACATTCGCC
GGTAAGAACG CGACAACCTG GGGCTACAAC GGTAATTTGC TGGGGCCAGC GGTACAGCTT
CACAAAGGAA AAAGCGTGAC CGTTGATATC CATAACCAAC TGGCCGAAGA CACGACGCTT
CACTGGCATG GTCTGGAGAT TCCAGGCATC GTCGACGGCG GTCCGCAGGG GATTATTCCC
GCAGGCGGAA CCCGTACGGT GACGTTTACG CCGGAGCAAC GCGCCGCGAC CTGCTGGATT
CATCCGCACA AACACGGCAA AACCGGGCGC CAGGTGGCGA TGGGCCTTGC CGGACTGGTG
CTGATTGAAG ATGACGAGAT TCGCAAATTG CGCCTGCCGA AACAGTGGGG CATCGACGAT
GTGCCGGTGA TCATTCAGGA CAAACGCTTC TCCGCCGATG GCCAGATTGA TTATCAACTG
GATATTATGA CCGCCGCCGT CGGCTGGTTT GGCGATACGC TGCTGACCAA TGGCGCTATC
TATCCGCAGC ATTCCGCTCC GAAAGGCTGG CTACGTCTGC GCTTGCTAAA TGGCTGTAAT
GCGCGTTCGC TGAATATCGC CGCCAGCGAT AATCGTCCGC TTTATGTGAT CGCCAGCGAC
GGCGGCCTGC TGGCGGAGCC GGTGAAAGTC ACCGAACTGC CGTTATTAAT GGGCGAGCGT
TTTGAAGTGC TGGTGGATAT CAGCGACGGG AAAGCCTTTG ATCTGGTGAC CCTGCCGGTC
AGCCAGATGG GAATGGCGAT CGCTCCGTTT GATAAACCGC ATCCGGTAAT GCGTATCCAG
CCGCTGCGGA TTACCGCCTC CGGTACGCTG CCGGATACGT TGACGACGAT GCCGGCGTTG
CCGTTGCTGG AAGGGCTGAC GGTGCGCAAT CTGAAACTGT CGATGGACCC ACGCCTTGAT
ATGATGGGGA TGCAAATGCT GATGAAGAAA TATGGCGCTC AGGCGATGAG CGGCATGGAT
CATGACAGCA TGAACGCGCA TATGCAGGGC GGCAATATGG GGCATGGCGA AATGGATCAT
GGCAACATGG ATCACAGCGG GATGAATCAT GGCGCGATGG GCAATATGAA TCACGGCGGA
AAATTCGACT TCCATAACGC TAACTTTATC AACGGCCAGG TCTTTGATAT GAACAAACCG
ATGTTCGCGG CGCAAAAAGG CCGACATGAA CGTTGGGTGA TTTCCGGCGT GGGTGACATG
ATGCTGCATC CTTTCCATAT TCACGGCACC CAGTTCCGTA TTTTGTCAGA GAACGGCAAA
GCGCCAGCGG CGCACAGAAC GGGCTGGAAG GATACGGTAC GCGTTGAGGG CGGTATCAGC
GAAGTGCTGG TCAAGTTCGA TCACGACGCG CCGAAGGAAC ATGCCTATAT GGCGCACTGT
CATCTGTTAG AACATGAAGA TACGGGAATG ATGTTAGGAT TTACGGTCTG A
 
Protein sequence
MLRRDFLKYS VALGVASALP LWSRAAFAAE RPALPIPDLL TADASNRMQL IVKAGQSTFA 
GKNATTWGYN GNLLGPAVQL HKGKSVTVDI HNQLAEDTTL HWHGLEIPGI VDGGPQGIIP
AGGTRTVTFT PEQRAATCWI HPHKHGKTGR QVAMGLAGLV LIEDDEIRKL RLPKQWGIDD
VPVIIQDKRF SADGQIDYQL DIMTAAVGWF GDTLLTNGAI YPQHSAPKGW LRLRLLNGCN
ARSLNIAASD NRPLYVIASD GGLLAEPVKV TELPLLMGER FEVLVDISDG KAFDLVTLPV
SQMGMAIAPF DKPHPVMRIQ PLRITASGTL PDTLTTMPAL PLLEGLTVRN LKLSMDPRLD
MMGMQMLMKK YGAQAMSGMD HDSMNAHMQG GNMGHGEMDH GNMDHSGMNH GAMGNMNHGG
KFDFHNANFI NGQVFDMNKP MFAAQKGRHE RWVISGVGDM MLHPFHIHGT QFRILSENGK
APAAHRTGWK DTVRVEGGIS EVLVKFDHDA PKEHAYMAHC HLLEHEDTGM MLGFTV