| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0181 |
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| Symbol | speE |
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| ID | 6875497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 192666 |
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| End bp | 193526 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642783428 |
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| Product | spermidine synthase |
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| Protein accession | YP_002214122 |
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| Protein GI | 198242627 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAAA ATACGATGTG GCATGAAACG CTACACGACC AGTTTGGTCA GTACTTTGCC
GTAGACAACG TTCTGTATCA TGAAAAAACC GACCACCAGG ATTTAATCAT CTTTGAAAAC
GCCGCTTTTG GCCGCGTGAT GGCGCTGGAC GGCGTGGTAC AGACCACCGA ACGCGACGAG
TTTATTTATC ATGAAATGAT GACCCATGTC CCGCTGCTGG CGCACGGTCA TGCGAAACAC
GTTCTGATTA TCGGCGGCGG CGACGGCGCA ATGCTACGTG AAGTTACCCG GCATAAAAAC
GTCGAAACCA TCACCATGGT AGAGATAGAC GCTGGCGTAG TCTCGTTTTG CCGTCAGTAT
TTACCCAACC ACAATGCCGG CAGCTACGAC GATCCGCGCT TTACGCTGGT AATCGACGAC
GGCGTGAATT TCGTCAATCA GACCCATCAG ACCTTTGATG TGATCATTTC CGACTGTACC
GATCCGATAG GCCCCGGCGA AAGCCTGTTT ACCTCCGCCT TTTATGAAGG CTGTAAGCGT
TGCCTGAATC CGGGCGGCAT TTTTGTCGCC CAGAACGGCG TGTGCTTCCT GCAGCAGGAT
GAAGCGCTCG ACAGCCACCG CAAGCTGAGT CATTACTTCA GCGATGTCGG CTTCTACCAG
GCGGCGATTC CGACCTATTA CGGCGGCATT ATGACCTTCG CCTGGGCGAC GGACAACGAC
GCTCTTCGCC ACCTGTCGAG CGAAATTATT CAGGCGCGTT TTCATGCCGC CGGACTCAAA
TGCCGCTATT ACAACCCGGC TATTCATGCC GCTGCATTTG CGCTACCGCA ATATCTACAT
GACGCACTGT CCGCACAGTG A
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| Protein sequence | MAENTMWHET LHDQFGQYFA VDNVLYHEKT DHQDLIIFEN AAFGRVMALD GVVQTTERDE
FIYHEMMTHV PLLAHGHAKH VLIIGGGDGA MLREVTRHKN VETITMVEID AGVVSFCRQY
LPNHNAGSYD DPRFTLVIDD GVNFVNQTHQ TFDVIISDCT DPIGPGESLF TSAFYEGCKR
CLNPGGIFVA QNGVCFLQQD EALDSHRKLS HYFSDVGFYQ AAIPTYYGGI MTFAWATDND
ALRHLSSEII QARFHAAGLK CRYYNPAIHA AAFALPQYLH DALSAQ
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