Gene SeD_A0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0171 
Symbol 
ID6872332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp181126 
End bp182751 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content57% 
IMG OID642783418 
Producthypothetical protein 
Protein accessionYP_002214112 
Protein GI198242405 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTGC CCTTTAAACC CCATCTCATT GCCCTTGTGT GCAGTGCCGG GTTATTTGCC 
GCTTCGGGCG TACTGTATGT TAAAAGCCGC GCTCCCGAAG CGCCCGCGCA GGCGGCGACT 
CCCGCCCCTG AGCAAACGCA GACCGCTGTG CCCGCGCCTG TCGCGAAAAC GACCTTTACC 
ACTGCGCAAA TTGATCAATG GGTCGCGCCT GTCGCGCTTT ATCCCGATGC CCTGCTTTCT 
CAGGTGCTCA TGGCCTCCAC CTACCCAGCG AACGTGGTTC AGGCCGTCCA GTGGTCGCGA 
GATAACCCCA CGCTGCAGGG CGATGCCGCT ATTCAAGCGG TGGCCAGCCA ACCGTGGGAC 
CCCAGCGTCA AATCGCTGGT CGCCTTTCCT CAGTTGATGG CGCTTATGGG CGAGAATCCG 
CAATGGGTGC AAAACCTGGG CGATGCGTTC TTAGCCCAGC CACAGGATGT GATGGATGCG 
GTGCAAAGGC TGCGCCTGCT CGCTCAACAA ACCGGTTCGC TAAAATCAAC GCCGCAGCAA 
ACCGTCACCA GCGTGCCGAA GTCCAGCGCT TCTACCGCCG TCACGACAAC AACCACCACC 
ACATCCGCCA GTACGCCAGC AACACCGTCG ACCGTCATCA AAATTGAACC CGCGAATCCG 
CAGGTGGTGT ACGTGCCGAA CTATAACCCC GCGACGGTGT ATGGCGCCTG GCCCAATACC 
GCTTATCCGC CGGTGTATTT ACCGCCCCCT CCGGGGCAGC AGTTTGCCGA TAGTTTTGTT 
AAAGGTTTTG GTTATAGTCT GGGCGTCGCC ACCACCTATG CGTTGTTCAG CAGCATAGAC 
TGGGATGACG ACGATCATCA CCACCATGAC GACGACCATC ATGATGATGA TTACCATCAT 
GGTGGTAACG GTTATCAACA TAATGGCGAT AATATCAACA TCAATGTCAA TAATTTCAAC 
CGGATATCCG GGCAAAACCT GCCGGGCCAA ACGATGGGCT GGCAGCATAA TCCCGCCTGG 
CGCAATGGCG TCCCCTATCC GAATAATACC GTTGCGCAAC GGTTCCATCC CACCAATGTT 
AGCGGCGGGT TAAGCGCAAT GCAGCAAGCG CCAGTGTCTC GCGACAGTCA GCGCCAGGCG 
GCCATGGCGC AATTCCAACA GCGCAGCCAT ACATCACCCG CTAACCTGTC AGGCGAGACA 
TCCCGCGACA GACAGCGCAA AGCGGCATCG CAGCAGTTAA ATCAAATTGC CCAGCGTAAT 
AATTACCGTG GCTATGACGG AACACAAAAC AGCAGTCGTC GCGAGGCGGC GCAGCAGACA 
CTGAATAAAT CCACCACGCA GCAGCATCGT TCCGAGCTGA AGGCTAAAGC CCAGCAGCAC 
CCTGTTTCAC AACAGCAGAG AGACACCGCC CGCCAGCGTA TTGAATCCTC TACGCCACAG 
CAGCGTCAGG CATTTCGCCA GAATATGCAC GCCAATGTGT TTAGCGGGAA CGACAGTCGA 
TCGCCGTCAT GGCAATCGCA ACAGCTACGC GGCCTGGAAA GCCGTCGCGG CAGTCACTTA 
AACACCGAGC AACGCGCCGC CGCGCGGGAA CATTTTTCTG AACATCATGA ATTTCATCGC 
CGTTAA
 
Protein sequence
MTLPFKPHLI ALVCSAGLFA ASGVLYVKSR APEAPAQAAT PAPEQTQTAV PAPVAKTTFT 
TAQIDQWVAP VALYPDALLS QVLMASTYPA NVVQAVQWSR DNPTLQGDAA IQAVASQPWD 
PSVKSLVAFP QLMALMGENP QWVQNLGDAF LAQPQDVMDA VQRLRLLAQQ TGSLKSTPQQ 
TVTSVPKSSA STAVTTTTTT TSASTPATPS TVIKIEPANP QVVYVPNYNP ATVYGAWPNT 
AYPPVYLPPP PGQQFADSFV KGFGYSLGVA TTYALFSSID WDDDDHHHHD DDHHDDDYHH 
GGNGYQHNGD NININVNNFN RISGQNLPGQ TMGWQHNPAW RNGVPYPNNT VAQRFHPTNV 
SGGLSAMQQA PVSRDSQRQA AMAQFQQRSH TSPANLSGET SRDRQRKAAS QQLNQIAQRN 
NYRGYDGTQN SSRREAAQQT LNKSTTQQHR SELKAKAQQH PVSQQQRDTA RQRIESSTPQ 
QRQAFRQNMH ANVFSGNDSR SPSWQSQQLR GLESRRGSHL NTEQRAAARE HFSEHHEFHR 
R