Gene SeD_A0170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0170 
Symbol 
ID6875642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp180322 
End bp181113 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content57% 
IMG OID642783417 
Producthypothetical protein 
Protein accessionYP_002214111 
Protein GI198243041 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGG TTATGTTAAA CGCTCTGTTA CTGTCGTTAC CCTTGCTGGG CTACGCGCAG 
GAACGGTTCC CCTCCCCGGA AGCGGCCGCC AGCGCCTTCG CCGCGGCGGT AGCCGGAAAA 
AACGAAACGC AGCTTACCGC GCTACTGGGC GATGACTGGC GGCAATTTCT GCCGCCGGAA 
GGTGCCGCTC CCGAGGCCGT GGCCCGCTTC AATCGTGACT GGCGCGAAGG CCATCGCATT 
GTACAGAAAG ACAATACGGC GCACCTGAAT GTCGGACGAG AAGACTGGCA GCTCCCGTTG 
CCCATGGTGA AAGAGACTGG CGGCTGGCGC TTTGATATGG CGGCAGCCGG GAATGAGATC 
CTCACCCGTA CTATTGGGCG AAATGAACTT TCTACCTTAC AGGCCATGCA TGCTTACGTT 
GATGCGCAGC AGGACTATTA CTTACAAAAC CATCGCTGGG CGCACAGGAT AATCAGTAGC 
GAAGGCCAAA AAGATGGCCT GTACTGGCCA ACCAAAGCAG GCGACATCCC CAGTCCGTTA 
GGCCCAAACT TTAGTCCCGC AGCGCCAGAC GAGGGTTACC ATGGCTACCA TTTCCGTATT 
ATCAGCGATA ACGACGGTCA CGGCGCGGCG CTTCTGGCCT GGCCGATGCA TTACAGCGAA 
ACCGGGGTGA TGAGTTTTAT GGTCAACCAG GACGATCGTA TTTATCAGGC GGATTTAGGC 
AAGGAGACGG AGAGTAAAGT TCAGGCTATC ACGCGTTTTG CGCCAGACGC GCAGTGGCAG 
GTCGCCGAAT AA
 
Protein sequence
MKKVMLNALL LSLPLLGYAQ ERFPSPEAAA SAFAAAVAGK NETQLTALLG DDWRQFLPPE 
GAAPEAVARF NRDWREGHRI VQKDNTAHLN VGREDWQLPL PMVKETGGWR FDMAAAGNEI 
LTRTIGRNEL STLQAMHAYV DAQQDYYLQN HRWAHRIISS EGQKDGLYWP TKAGDIPSPL 
GPNFSPAAPD EGYHGYHFRI ISDNDGHGAA LLAWPMHYSE TGVMSFMVNQ DDRIYQADLG 
KETESKVQAI TRFAPDAQWQ VAE