Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0167 |
Symbol | lpdA |
ID | 6872995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 178287 |
End bp | 179711 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642783414 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_002214108 |
Protein GI | 198244895 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.735558 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTACTG AAATCAAAAC TCAGGTCGTG GTACTTGGGG CGGGCCCGGC AGGCTATTCT GCCGCTTTCC GTTGCGCTGA TTTAGGTCTG GAAACCGTAA TTGTAGAACG TTACAGCACC CTTGGCGGTG TTTGTTTGAA CGTCGGCTGT ATCCCTTCTA AGGCGCTGCT GCACGTAGCA AAAGTTATCG AAGAAGCCAA AGCGCTGGCT GAACACGGTA TCGTCTTCGG TGAGCCGAAA ACCGATATCG ACAAGATTCG TACCTGGAAA GAGAAAGTGA TCACGCAGCT GACCGGTGGT CTGGCGGGTA TGGCCAAAGG CCGTAAGGTG AAAGTGGTCA ACGGTCTGGG TAAATTCACC GGGGCGAACA CCCTGGAAGT GGAAGGCGAA AACGGCAAAA CCGTAATCAA CTTCGATAAC GCGATCATCG CGGCGGGTTC TCGTCCGATC CAATTACCGT TTATTCCGCA TGAAGACCCG CGCGTATGGG ATTCTACCGA CGCTCTGGAA CTGAAAGAAG TACCGAAGCG TATGCTGGTC ATGGGCGGCG GTATCATCGG TCTGGAAATG GGTACCGTAT ACCACGCGCT GGGTTCAGAG ATCGACGTGG TTGAAATGTT CGACCAGGTT ATCCCGGCGG CTGATAAAGA TATCGTTAAA GTCTTCACCA AGCGCATCAG CAAGAAATTC AACCTGATGC TGGAAACCAA AGTGACTGCC GTTGAAGCGA AAGAAGACGG TATCTACGTT TCGATGGAAG GCAAAAAAGC CCCGGCTGAA GCGCAGCGTT ACGACGCCGT GCTGGTAGCG ATCGGTCGTG TGCCGAACGG TAAAAACCTC GACGCGGGCA AAGCTGGCGT GGAAGTTGAC GACCGTGGCT TTATCCGCGT GGACAAACAG CTGCGCACCA ACGTGCCGCA CATCTTCGCT ATCGGCGATA TCGTCGGTCA GCCGATGCTG GCGCATAAAG GCGTTCACGA AGGCCACGTT GCCGCTGAAG TTATCGCCGG GAAGAAACAC TACTTCGATC CGAAAGTTAT CCCGTCTATC GCGTACACCG AGCCAGAAGT GGCATGGGTT GGCCTGACCG AGAAAGAAGC GAAAGAAAAA GGCATCAGCT ATGAAACCGC CACCTTCCCG TGGGCAGCTT CTGGCCGTGC TATCGCTTCT GACTGTGCAG ATGGTATGAC CAAACTGATT TTCGACAAAG AATCTCACCG CGTGATCGGC GGGGCGATTG TCGGCACCAA CGGCGGCGAG CTGCTGGGTG AAATCGGTCT GGCGATCGAA ATGGGCTGTG ACGCGGAAGA CATCGCGCTG ACCATTCATG CGCACCCGAC GCTGCACGAG TCCGTCGGTC TGGCTGCTGA AGTGTTCGAA GGTAGTATTA CCGACCTGCC GAACCCGAAA GCGAAGAAGA AATAA
|
Protein sequence | MSTEIKTQVV VLGAGPAGYS AAFRCADLGL ETVIVERYST LGGVCLNVGC IPSKALLHVA KVIEEAKALA EHGIVFGEPK TDIDKIRTWK EKVITQLTGG LAGMAKGRKV KVVNGLGKFT GANTLEVEGE NGKTVINFDN AIIAAGSRPI QLPFIPHEDP RVWDSTDALE LKEVPKRMLV MGGGIIGLEM GTVYHALGSE IDVVEMFDQV IPAADKDIVK VFTKRISKKF NLMLETKVTA VEAKEDGIYV SMEGKKAPAE AQRYDAVLVA IGRVPNGKNL DAGKAGVEVD DRGFIRVDKQ LRTNVPHIFA IGDIVGQPML AHKGVHEGHV AAEVIAGKKH YFDPKVIPSI AYTEPEVAWV GLTEKEAKEK GISYETATFP WAASGRAIAS DCADGMTKLI FDKESHRVIG GAIVGTNGGE LLGEIGLAIE MGCDAEDIAL TIHAHPTLHE SVGLAAEVFE GSITDLPNPK AKKK
|
| |