Gene SeD_A0160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0160 
Symbol 
ID6871174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp168139 
End bp169089 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content54% 
IMG OID642783407 
Productalpha-N-arabinofuranosidase 2 
Protein accessionYP_002214101 
Protein GI198245039 
COG category[R] General function prediction only 
COG ID[COG3940] Predicted beta-xylosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAACT GGCCAAACCC GTTTATTGAA CAACGTGCCG ATCCGTTTAT TTTACGCGAC 
GGCAGCGATT ACTACTTTAT TGCCTCCGTA CCGGAATATG ACAGGCTGGA AATCCGCCGG 
GCTGATTCGC TGGAAGGGTT GCGCGCCGCC GACCCCGTTG TCGTCTGGCG CAAACCGGAA 
AGTGGCCCGA TGAGCCAGCT CATCTGGGCA CCGGAAATGC ACCGCATCAA CGGCAAGTGG 
TACATCTATT TTGCCGCTAC CCATACTCAA GCGCTTGATA AGCTGGGAAT GTTCCAGCAT 
CGCATGTTTG CCCTGGAGTG CGCCGATGCC GACCCACTCA CCGGCAAGTG GACGGAGAAA 
GGTCAAATTA AAACACCGTT TGATACCTTC GCCCTCGATG CCACCACTTT TTATCATCAG 
GGAAAGCAGT GGTATCTGTG GGCGCAAAAA GCGCCGGATA TTGCCGGTAA CTCAAATATT 
TATCTGGCTG AACTGGAAAA TCCGTGGACG ATTAAAGGCG AGCCGGTAAG ACTCAGTAAG 
CCAGAGTACG ACTGGGAGTG TCGGGGTTTT TGGGTTAACG AAGGTCCGGC CGTCGTGGTG 
CATGGCGACA AGCTGTTTAT CAGCTATTCG GCCAGCGCCA CCGATGAAAA CTACTGTATG 
GGATTACTGT GGATTAACGT AAACGACGAT CCGCGCGATC CGGCCAACTG GCATAAATCA 
CCGCGCCCGG TCTTTACCAC CAGCTATGAA AATCGCCAGT ATGGGCCGGG ACATAACAGC 
TTTACGCAAA CGCCGGAAGG TGAAGATGTA CTGGTGTACC ACGCGAGAAA TTACACCGAA 
ATTGAAGGCG ATCCGTTGTA CGATCCCAAC CGCCATACGC GTCTGAAACG GGTGCGCTGG 
GACGAAAACG GGATGCCTGA TTTTGGCGTG CCGCCAGCCG ATACGATCTA A
 
Protein sequence
MANWPNPFIE QRADPFILRD GSDYYFIASV PEYDRLEIRR ADSLEGLRAA DPVVVWRKPE 
SGPMSQLIWA PEMHRINGKW YIYFAATHTQ ALDKLGMFQH RMFALECADA DPLTGKWTEK 
GQIKTPFDTF ALDATTFYHQ GKQWYLWAQK APDIAGNSNI YLAELENPWT IKGEPVRLSK 
PEYDWECRGF WVNEGPAVVV HGDKLFISYS ASATDENYCM GLLWINVNDD PRDPANWHKS 
PRPVFTTSYE NRQYGPGHNS FTQTPEGEDV LVYHARNYTE IEGDPLYDPN RHTRLKRVRW 
DENGMPDFGV PPADTI