Gene SeD_A0158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0158 
Symbol 
ID6871734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp166633 
End bp167196 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content55% 
IMG OID642783405 
ProductN-acetyl-anhydromuranmyl-L-alanine amidase 
Protein accessionYP_002214099 
Protein GI198242926 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCCAG ATAAGGGTTG GTTAGTAGAG GCGCGACGCG TCCCTTCTCC GCATTATGAT 
TGCCGTCCGG ATGACGAAAA ACCGTCCTTG CTGGTGGTGC ATAATATTAG CCTGCCCCCC
GGCGAGTTTG GCGGTCCGTG GATCGATGCA TTATTCACCG GAACGATAGA TCCAGACGCC
CATCCTTTTT TTGCAGAAAT CGCTCATCTT CGTGTTTCGG CCCATTGTCT GATTCGTCGC
GACGGTGAAA TCGTCCAGTA TGTGCCTTTT GATAAGCGTG CGTGGCATGC GGGCGTATCA
AACTATCAGG GGCGGGAACG TTGTAATGAT TTCTCCATTG GTATTGAGCT GGAGGGGACA
GATACGCTGG CTTATACCGA TGCGCAGTAT CAGCAGCTAG CCGCCGTGAC GCGCACGCTT
ATCGCTTGCT ATCCGGCGAT CGCCGACAAT ATGACCGGAC ACTGCAACAT TGCGCCTGAC
CGCAAAACGG ACCCTGGCCC TGCCTTTGAC TGGCCGCGCT TTCGCGCTTT GGTAGCCCTC
TCGTCGCACA AGGAGATGAC ATGA
 
Protein sequence
MLPDKGWLVE ARRVPSPHYD CRPDDEKPSL LVVHNISLPP GEFGGPWIDA LFTGTIDPDA 
HPFFAEIAHL RVSAHCLIRR DGEIVQYVPF DKRAWHAGVS NYQGRERCND FSIGIELEGT
DTLAYTDAQY QQLAAVTRTL IACYPAIADN MTGHCNIAPD RKTDPGPAFD WPRFRALVAL
SSHKEMT