Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0155 |
Symbol | |
ID | 6875090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 163598 |
End bp | 164983 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642783402 |
Product | hypothetical protein |
Protein accession | YP_002214096 |
Protein GI | 198244503 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGACG CTCAGCTCAA CACCTTGTGT CAACGTCATC AGGCTGTACT GATCAATAGC GCCAGCAACA GTATCACTGT TGCGGTGGTC GACGCGCCCT CTCATGCGTT ACTGGACGCT CTGCATTTCG CCACGCAAAA ACAGATTGAT ATTGTGTGCT GGACTCGCCA GCAAATGGAA AATCATCGGC ATAAGCCGGA TCAGGCACCC TCGGCAAACG CCGCGAAAGG CGGAGAAACC GCAGCCCAGC TTCTCAATCA GACATTACGC TCGGCGATGG CGAAACGCGC CTCTGATATC CATCTCGAAC CCGGCGCCAG CCGCTACCGA ATAAGACTCC GCATCGACGG CGTTCTTCAT ATTCTGCAGG ACATCGCCAA AGAGACGGGG CTTGCGCTGA CGGCCAGATT GAAAGTCCTG GGAAATTTGG ACATCGCTGA ACATCGACTG CCGCAGGACG GGCAATTTAC CGTTGACCTG GCGGGCGACA GCATCTCTTT TCGTATCGCC ACGCTTCCCT GTAAAGAAGG CGAAAAAGTC GTCTTACGGT TGTTGCATCA GGTTGAACAA ACGCTGGATC TGGACACGCT GGGCATGTAC GGGGCACAAC TTACCGCTTT TAGACAAGCC CTACAGCAAC CTCAGGGGCT GGTACTGGTG ACTGGCCCCA CCGGTAGCGG AAAAACGGTC ACGCTATACA GCGCGCTACA AACCCGGAAT ACGCCGGGTA TCAACCTCTG TAGCGTTGAG GATCCGATAG AAATTCCACT GGATGGGATT AACCAGACGC AGATCCATCC CCGCGCCGGG CTCACCTTTC AAAATGTGCT GCGTGCGCTA TTACGCCAGG ACCCTGACAT CATCATGGTA GGTGAAATTC GTGACGGCGA CACCGCAGAA ATCGCCATTA AGGCGGCACA AACGGGCCAT CTGGTACTTT CAACGCTACA TACGAACTCC ACCAGTGAAA CCCTGATACG TTTGCAGCAA ATGGGCGTAG CACGCTGGAT GATCTCATCG GCGCTTACGC TGGTGGTAGC GCAACGCCTG GTAAGGAAGC TTTGCCCGCA CTGCAAACAG CGCCTGAGCG ATCCCGTAGT GCTATCGCCC AATCTTTGGC CCAGCGCGCT ACCGCTCTGG CAGGCAAACG GCTGTCAGCA TTGCTACCAC GGCTTTTATG GCCGAACCGC GTTATTCGAA GTGTTAACCG TTACCCCGGC ATTACGTCAG TTAATTGCGA GCGGCGCATC GGCGCAAGCA CTGGAAGCCC ACCTCCAACA GACCGGTACA GGGACGCTTT TTGAAAATGG CTGTCGCGCC GTTGAGCAAG GCATGACGTC CTTTGAAGAG ATACTGCGCG TTCTGGGAAT GCCCCATGAG CGTTAA
|
Protein sequence | MKDAQLNTLC QRHQAVLINS ASNSITVAVV DAPSHALLDA LHFATQKQID IVCWTRQQME NHRHKPDQAP SANAAKGGET AAQLLNQTLR SAMAKRASDI HLEPGASRYR IRLRIDGVLH ILQDIAKETG LALTARLKVL GNLDIAEHRL PQDGQFTVDL AGDSISFRIA TLPCKEGEKV VLRLLHQVEQ TLDLDTLGMY GAQLTAFRQA LQQPQGLVLV TGPTGSGKTV TLYSALQTRN TPGINLCSVE DPIEIPLDGI NQTQIHPRAG LTFQNVLRAL LRQDPDIIMV GEIRDGDTAE IAIKAAQTGH LVLSTLHTNS TSETLIRLQQ MGVARWMISS ALTLVVAQRL VRKLCPHCKQ RLSDPVVLSP NLWPSALPLW QANGCQHCYH GFYGRTALFE VLTVTPALRQ LIASGASAQA LEAHLQQTGT GTLFENGCRA VEQGMTSFEE ILRVLGMPHE R
|
| |