Gene SeD_A0148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0148 
Symbol 
ID6872850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp158622 
End bp159545 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content52% 
IMG OID642783396 
ProductLysR family transcriptional regulator 
Protein accessionYP_002214090 
Protein GI198242490 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCATG ATGTGATGTC CATATTGCAT GCTTTTTGCA TGATTGCTGA AAACCATAGC 
TTCACGCGGG CAGCGGCGCA GTTACATATT TCTACATCGG CGTTAAGTCA GAATATGCGC 
CAACTGGAGG ATGAACTTGG CGTGAAATTG TTGAACCGAA CCACCCGGCG TGTCGGTTTG 
ACAGAAGCAG GACATGCCTT TCTTGCCAGT ATCAGGCCCG CATTAAACCA TATTGATGAG 
GCGATGGAAC ATGCCCGCCA GAGCCGCGAT ATACCCGGAG GGACATTACG CCTGACCGTA 
CCGCGCACGG CGGCTACGCT TCTGTTACAA CCTAATCTCG CCGGTTTCAT GCGCGATTAT 
CCCGATATTC GGCTGGATAT CGATGTGAAT GACGGTTTTG TGGATTTAAT TAACGAACGC 
TTTGATGCCG GTATTCGCTT TGGCGATGCG GTACAACTTG ATATGAATGT CGTTCCGCTC 
GGTGATGTTT TACGCCCGGC GATCGTAGCA TCCCCTGCAT ACCTTGCGCG TTTTGGCACG 
CCGCTGCACC CTCAGGAACT CATCAATCAC CGCTGCCTTT GCCATCGTTT TACGCGTGAG 
AGCGGGCTAT ATCGGTGGGA GTTTGTTCAC GGAGCGCAAC GGCTGGAAAT TACGCCGGAA 
GCCGCGTTAA TGGTGAATGA TAAAGCGTTG CGTCTCTCCG CCGCGCGTGA TGGGGCAGGG 
CTAACCTATG TTTTTGAACA GGATGTCCAC GAAGACTTAC AGGATGGGCG GTTGTGTTCC 
GTACTTGAGG AGTGGCTGCC TGCGGCGGAC CGGTTTTATT TGTATTATCC CGGCCGCGCG 
CATATGGCGC CAAAACTACG CGTATTTATT GATTATTTTT GTCATAAGGC GATATTGCCG 
TCTCAACAGA GCCATCACCG TTAG
 
Protein sequence
MRHDVMSILH AFCMIAENHS FTRAAAQLHI STSALSQNMR QLEDELGVKL LNRTTRRVGL 
TEAGHAFLAS IRPALNHIDE AMEHARQSRD IPGGTLRLTV PRTAATLLLQ PNLAGFMRDY 
PDIRLDIDVN DGFVDLINER FDAGIRFGDA VQLDMNVVPL GDVLRPAIVA SPAYLARFGT 
PLHPQELINH RCLCHRFTRE SGLYRWEFVH GAQRLEITPE AALMVNDKAL RLSAARDGAG 
LTYVFEQDVH EDLQDGRLCS VLEEWLPAAD RFYLYYPGRA HMAPKLRVFI DYFCHKAILP 
SQQSHHR