Gene SeD_A0132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0132 
SymbolmurE 
ID6874618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp139095 
End bp140582 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content59% 
IMG OID642783381 
ProductUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 
Protein accessionYP_002214075 
Protein GI198245705 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0769] UDP-N-acetylmuramyl tripeptide synthase 
TIGRFAM ID[TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.504054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGATC GTAATTTGCG CGACCTTCTT GCTCCGTGGG TGGCTGGACT ACCCGCGCGA 
GAACTGCGAG AGATGACGCT CGACAGCCGT GTGGCTGCGG CGGGCGATCT CTTTGTGGCA
GTGGTGGGTC ATCAGGCGGA CGGGCGTCGA TATATCCCGC AGGCGATAGC GCAAGGCGTA
GCTGCCATTA TTGCAGAGGC GAAAGACGAG GCGAGCGACG GTGAGATTCG CGAAATGCAC
GGCGTACCAG TCGTCTATCT CAGCCAGCTC AATGAGCGTT TATCTGCGCT GGCGGGCCGC
TTTTACCATG AGCCATCTGA AAACATGCGT CTGGTGGCGG TGACCGGCAC CAATGGCAAG
ACCACCACCA CCCAACTACT GGCGCAGTGG AGCCAGTTGC TCGGCGAAAC CAGCGCAGTG
ATGGGAACGG TAGGCAACGG ACTGTTGGGT AAAGTGATCC CGACGGAGAA CACAACCGGT
TCCGCTGTGG ATGTTCAGCA TGTGCTGGCC AGTCTGGTTG CGCAGGGCGC GACCTTCGGC
GCGATGGAAG TCTCTTCTCA CGGCCTGGTG CAGCATCGCG TGGCGGCGTT GAAATTTGCC
GCCTCCGTGT TTACTAATTT GAGCCGCGAC CATCTCGACT ATCATGGCGA TATGGCGCAT
TACGAGGCGG CAAAATGGAT GCTTTATTCC ACCCACCATC ACGGTCAGGC AATCGTCAAC
GCCGATGATG AAGTTGGACG CCGCTGGCTG GCGTCGCTAC CCGATGCGGT CGCAGTATCG
ATGGAAGGGC ATATCAACCC TAACTGTCAC GGTCGTTGGC TGAAAGCGGA GGCGGTGGAG
TACCACGACC GCGGAGCGAC GATTCGTTTT GCTTCAAGCT GGGGTGACGG CGAAATCGAA
AGCCGCCTGA TGGGCGCGTT TAACGTCAGC AACTTACTGC TGGCATTGGC GACGCTGCTG
GCGCTGGGCT ATCCGTTAAC GGATTTGCTG AAAACCGCCG CGCGTTTGCA GCCGGTTTGC
GGGCGTATGG AAGTGTTCAC TGCGCCAGGC AAACCGACGG TGGTGGTGGA TTACGCGCAC
ACGCCGGATG CGCTGGAAAA AGCGTTGCAG GCGGCGCGTC TGCATTGCGC CGGAAAATTG
TGGTGCGTCT TTGGCTGTGG CGGGGATCGT GACAAAGGTA AGCGCCCACT CATGGGGGCC
ATTGCCGAAG AATTCGCGGA TATCGTCGTG GTGACTGACG ATAACCCGCG TACCGAGGAG
CCGCGCGCCA TTATCAACGA TATTCTGGCC GGAATGCTGG ACGCCGGGCA GGTCAGGGTA
ATGGAAGGCC GCGCTGAGGC GGTAACCAAT GCCATTATGC AGGCAAAAGA CAATGACGTC
GTGCTGATTG CAGGTAAAGG GCACGAGGAT TACCAGATTG TCGGCACGCA GCGTCTTGAT
TATTCAGACC GCGTGACCGC AGCGCGTTTG CTGGGGGTGA TCGCATGA
 
Protein sequence
MADRNLRDLL APWVAGLPAR ELREMTLDSR VAAAGDLFVA VVGHQADGRR YIPQAIAQGV 
AAIIAEAKDE ASDGEIREMH GVPVVYLSQL NERLSALAGR FYHEPSENMR LVAVTGTNGK
TTTTQLLAQW SQLLGETSAV MGTVGNGLLG KVIPTENTTG SAVDVQHVLA SLVAQGATFG
AMEVSSHGLV QHRVAALKFA ASVFTNLSRD HLDYHGDMAH YEAAKWMLYS THHHGQAIVN
ADDEVGRRWL ASLPDAVAVS MEGHINPNCH GRWLKAEAVE YHDRGATIRF ASSWGDGEIE
SRLMGAFNVS NLLLALATLL ALGYPLTDLL KTAARLQPVC GRMEVFTAPG KPTVVVDYAH
TPDALEKALQ AARLHCAGKL WCVFGCGGDR DKGKRPLMGA IAEEFADIVV VTDDNPRTEE
PRAIINDILA GMLDAGQVRV MEGRAEAVTN AIMQAKDNDV VLIAGKGHED YQIVGTQRLD
YSDRVTAARL LGVIA