Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0132 |
Symbol | murE |
ID | 6874618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 139095 |
End bp | 140582 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642783381 |
Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
Protein accession | YP_002214075 |
Protein GI | 198245705 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.504054 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAGATC GTAATTTGCG CGACCTTCTT GCTCCGTGGG TGGCTGGACT ACCCGCGCGA GAACTGCGAG AGATGACGCT CGACAGCCGT GTGGCTGCGG CGGGCGATCT CTTTGTGGCA GTGGTGGGTC ATCAGGCGGA CGGGCGTCGA TATATCCCGC AGGCGATAGC GCAAGGCGTA GCTGCCATTA TTGCAGAGGC GAAAGACGAG GCGAGCGACG GTGAGATTCG CGAAATGCAC GGCGTACCAG TCGTCTATCT CAGCCAGCTC AATGAGCGTT TATCTGCGCT GGCGGGCCGC TTTTACCATG AGCCATCTGA AAACATGCGT CTGGTGGCGG TGACCGGCAC CAATGGCAAG ACCACCACCA CCCAACTACT GGCGCAGTGG AGCCAGTTGC TCGGCGAAAC CAGCGCAGTG ATGGGAACGG TAGGCAACGG ACTGTTGGGT AAAGTGATCC CGACGGAGAA CACAACCGGT TCCGCTGTGG ATGTTCAGCA TGTGCTGGCC AGTCTGGTTG CGCAGGGCGC GACCTTCGGC GCGATGGAAG TCTCTTCTCA CGGCCTGGTG CAGCATCGCG TGGCGGCGTT GAAATTTGCC GCCTCCGTGT TTACTAATTT GAGCCGCGAC CATCTCGACT ATCATGGCGA TATGGCGCAT TACGAGGCGG CAAAATGGAT GCTTTATTCC ACCCACCATC ACGGTCAGGC AATCGTCAAC GCCGATGATG AAGTTGGACG CCGCTGGCTG GCGTCGCTAC CCGATGCGGT CGCAGTATCG ATGGAAGGGC ATATCAACCC TAACTGTCAC GGTCGTTGGC TGAAAGCGGA GGCGGTGGAG TACCACGACC GCGGAGCGAC GATTCGTTTT GCTTCAAGCT GGGGTGACGG CGAAATCGAA AGCCGCCTGA TGGGCGCGTT TAACGTCAGC AACTTACTGC TGGCATTGGC GACGCTGCTG GCGCTGGGCT ATCCGTTAAC GGATTTGCTG AAAACCGCCG CGCGTTTGCA GCCGGTTTGC GGGCGTATGG AAGTGTTCAC TGCGCCAGGC AAACCGACGG TGGTGGTGGA TTACGCGCAC ACGCCGGATG CGCTGGAAAA AGCGTTGCAG GCGGCGCGTC TGCATTGCGC CGGAAAATTG TGGTGCGTCT TTGGCTGTGG CGGGGATCGT GACAAAGGTA AGCGCCCACT CATGGGGGCC ATTGCCGAAG AATTCGCGGA TATCGTCGTG GTGACTGACG ATAACCCGCG TACCGAGGAG CCGCGCGCCA TTATCAACGA TATTCTGGCC GGAATGCTGG ACGCCGGGCA GGTCAGGGTA ATGGAAGGCC GCGCTGAGGC GGTAACCAAT GCCATTATGC AGGCAAAAGA CAATGACGTC GTGCTGATTG CAGGTAAAGG GCACGAGGAT TACCAGATTG TCGGCACGCA GCGTCTTGAT TATTCAGACC GCGTGACCGC AGCGCGTTTG CTGGGGGTGA TCGCATGA
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Protein sequence | MADRNLRDLL APWVAGLPAR ELREMTLDSR VAAAGDLFVA VVGHQADGRR YIPQAIAQGV AAIIAEAKDE ASDGEIREMH GVPVVYLSQL NERLSALAGR FYHEPSENMR LVAVTGTNGK TTTTQLLAQW SQLLGETSAV MGTVGNGLLG KVIPTENTTG SAVDVQHVLA SLVAQGATFG AMEVSSHGLV QHRVAALKFA ASVFTNLSRD HLDYHGDMAH YEAAKWMLYS THHHGQAIVN ADDEVGRRWL ASLPDAVAVS MEGHINPNCH GRWLKAEAVE YHDRGATIRF ASSWGDGEIE SRLMGAFNVS NLLLALATLL ALGYPLTDLL KTAARLQPVC GRMEVFTAPG KPTVVVDYAH TPDALEKALQ AARLHCAGKL WCVFGCGGDR DKGKRPLMGA IAEEFADIVV VTDDNPRTEE PRAIINDILA GMLDAGQVRV MEGRAEAVTN AIMQAKDNDV VLIAGKGHED YQIVGTQRLD YSDRVTAARL LGVIA
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