Gene SeD_A0124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0124 
SymbolleuO 
ID6874016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp130185 
End bp131129 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content48% 
IMG OID642783373 
Productleucine transcriptional activator 
Protein accessionYP_002214067 
Protein GI198244158 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.442889 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGAGG TCAAAACCGA AAAGCCGCAT CTTTTAGATA TGGGCAAACC ACAGCTTCGC 
ATGGTTGATT TGAACCTATT GACCGTGTTC GATGCGGTAA TGCAAGAGCA GAATATTACG
CGCGCCGCCC ACACGCTGGG AATGTCGCAG CCTGCGGTCA GTAACGCCGT AGCGCGTCTG
AAGGTTATGT TTAATGACGA ACTTTTTGTT CGATATGGAC GAGGAATTCA GCCGACTGCC
CGTGCATTTC AGTTATTTGG TTCAGTCCGT CAGGCGTTAC AATTGGTGCA AAATGAATTG
CCGGGATCGG GGTTTGAGCC GACCAGCAGC GAACGTGTAT TCAATCTTTG CGTGTGCAGT
CCGCTGGATA ATATCCTGAC GTCACAGATT TATAATCGTG TAGAAAAAAT TACGCCAAAT
ATTCATGTCG TTTTTAAAGC GTCGTTGAAT CAGAATACTG AGCATCAGTT ACGCTATCAG
GAAACCGAGT TCGTTATTAG TTATGAAGAA TTCCGTCGTC CTGAGTTTAC CAGCGTACCG
CTATTTAAAG ATGAAATGGT TTTAGTCGCC AGCCGAAAAC ACCCGCGTAT TAGCGGCCCG
CTACTGGAAG GCGATGTTTA TAATGAACAA CATGCGGTTG TTTCTCTCGA TCGTTATGCG
TCATTTAGTC AGCCGTGGTA TGACACGCCG GATAAACAGT CGAGCGTGGC TTATCAGGGC
ATGGCGCTTA TCAGCGTTCT GAACGTGGTT TCGCAGACGC ATTTGGTCGC TATTGCCCCG
CGCTGGCTGG CGGAAGAGTT TGCGGAATCG CTGGATCTGC AAATATTGCC GTTGCCTTTA
AAACTGAATA GCCGGACATG CTACCTTTCC TGGCATGAAG CGGCTGGGCG TGATAAAGGG
CACCAATGGA TGGAAGATTT ATTAGTTTCT GTTTGTAAGC GATAA
 
Protein sequence
MPEVKTEKPH LLDMGKPQLR MVDLNLLTVF DAVMQEQNIT RAAHTLGMSQ PAVSNAVARL 
KVMFNDELFV RYGRGIQPTA RAFQLFGSVR QALQLVQNEL PGSGFEPTSS ERVFNLCVCS
PLDNILTSQI YNRVEKITPN IHVVFKASLN QNTEHQLRYQ ETEFVISYEE FRRPEFTSVP
LFKDEMVLVA SRKHPRISGP LLEGDVYNEQ HAVVSLDRYA SFSQPWYDTP DKQSSVAYQG
MALISVLNVV SQTHLVAIAP RWLAEEFAES LDLQILPLPL KLNSRTCYLS WHEAAGRDKG
HQWMEDLLVS VCKR