Gene SeD_A0121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0121 
SymbolleuB 
ID6874512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp126692 
End bp127783 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content56% 
IMG OID642783371 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_002214065 
Protein GI198244310 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.165091 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAGA ACTATCATAT TGCCGTACTG CCGGGCGACG GTATCGGCCC GGAAGTCATG 
GCGCAAGCCC TGAAAGTTAT GGATGCGGTA CGCAGCCGTT TTGATATGCG TATAACCACC
AGCCACTATG ACGTCGGCGG TATTGCTATC GACAATCATG GTCATCCACT GCCGAAAGCC
ACCGTTGAAG GGTGCGAGCA GGCGGATGCC ATTCTGTTTG GCTCCGTCGG CGGCCCGAAA
TGGGAAAATT TGCCCCCGGA AAGCCAGCCA GAGCGCGGCG CCCTGCTGCC GCTGCGCAAA
CATTTCAAAT TATTCAGTAA CCTGCGTCCG GCGAAACTGT ATCAGGGACT GGAAGCATTT
TGCCCGTTGC GCGCCGATAT CGCCGCTAAC GGTTTCGATA TCCTGTGCGT GCGCGAGCTG
ACCGGCGGGA TCTATTTCGG ACAGCCAAAA GGCCGCGAAG GCAGCGGTCA GTACGAAAAA
GCCTTTGATA CCGAAGTTTA TCACCGCTTT GAGATCGAGC GCATTGCCCG TATCGCCTTT
GAATCGGCGC GTAAACGCCG CCGTAAAGTC ACCTCTATTG ATAAAGCCAA CGTACTGCAA
AGCTCTATCC TGTGGCGTGA AATCGTCAAT GATGTCGCGA AAACGTATCC CGATGTGGAA
CTCGCGCACA TGTATATCGA TAACGCCACC ATGCAGTTGA TTAAAGACCC GTCGCAGTTT
GACGTACTGC TGTGCTCTAA CCTGTTCGGC GACATTCTGT CCGACGAATG CGCCATGATC
ACCGGCTCAA TGGGGATGTT GCCCTCCGCC AGCCTGAACG AGCAAGGGTT TGGCCTGTAT
GAACCGGCTG GCGGCTCCGC GCCGGATATC GCCGGGAAAA ATATCGCCAA TCCAATTGCG
CAGATCCTGT CGCTGGCGCT GCTGCTGCGC TACAGCCTGG ATGCCAACGA TGCGGCAACA
GCCATTGAAC AGGCGATCAA TCGCGCATTA GAAGAGGGCG TTCGCACCGG CGATTTAGCC
AGGGGCGCTG CCGCAGTCAG TACCGATGAG ATGGGCGATA TTATCGCCCG CTATGTCGCA
GAAGGGGTGT AA
 
Protein sequence
MSKNYHIAVL PGDGIGPEVM AQALKVMDAV RSRFDMRITT SHYDVGGIAI DNHGHPLPKA 
TVEGCEQADA ILFGSVGGPK WENLPPESQP ERGALLPLRK HFKLFSNLRP AKLYQGLEAF
CPLRADIAAN GFDILCVREL TGGIYFGQPK GREGSGQYEK AFDTEVYHRF EIERIARIAF
ESARKRRRKV TSIDKANVLQ SSILWREIVN DVAKTYPDVE LAHMYIDNAT MQLIKDPSQF
DVLLCSNLFG DILSDECAMI TGSMGMLPSA SLNEQGFGLY EPAGGSAPDI AGKNIANPIA
QILSLALLLR YSLDANDAAT AIEQAINRAL EEGVRTGDLA RGAAAVSTDE MGDIIARYVA
EGV