| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0112 |
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| Symbol | tbpA |
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| ID | 6874660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 120984 |
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| End bp | 121967 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642783365 |
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| Product | thiamine transporter substrate binding subunit |
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| Protein accession | YP_002214059 |
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| Protein GI | 198245931 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4143] ABC-type thiamine transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily
[TIGR01276] thiamine ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTAAAAA AATATCTTCC GCTTTTACTC CTGTGCGCGG CGCCTGCTTT CGCCAAACCC
GTTCTCACCG TCTATACCTA CGACTCGTTC GCCGCCGACT GGGGGCCAGG CCCGGCGGTG
AAAAAAGCGT TTGAAGCCGA TTGCAACTGC GAGCTGAAAC TGGTGGCGCT GGAGGATGGC
GTTTCGCTGC TCAACCGCCT GCGGATGGAG GGGAAGAACA GCAAAGCCGA TGTGGTGTTG
GGGCTGGACA ATAATCTGCT GGAAGCGGCC ACGCAAACTA AACTCTTTGC CAAAAGCGGC
GTGGCGAATG AGGCGGTCAA GGTGCCCGGC GGCTGGAAAA ACGACACATT TGTGCCGTTC
GATTACGGCT ATTTCGCCTT TGTCTACGAT AAAAGCAAGC TGAAAAATCC GCCGAAAAGC
CTGAAAGAAC TGGTCGAGAG CGATCAAAAA TGGCGGGTAA TTTATCAGGA CCCGCGTACC
AGTACGCCAG GGCTGGGGCT GTTACTGTGG ATGCGCAAAG TCTATGGCGA TAACGCGCCG
CAGGCCTGGC AAAAACTGGC GGCCAAAACG GTGACGGTGA CGAAAGGCTG GAGCGAGGCC
TACGGCTTAT TTCTGAAAGG TGAAAGCGAT TTGGTGCTCA GTTACACCAC CTCTCCGGCG
TATCACATTA TTGAAGAGAA GAAGGACAAT TACGCCGCCG CGAACTTCAG CGAAGGCCAT
TACTTACAGG TAGAAGTCGC GGCGCGTACC GTCGCCAGTA AGCAGCCGGA ACTGGCGGAG
AAATTCCTCA AATTTATGGT TTCTCCGGCG TTTCAGAACG CCATACCCAC CGGCAACTGG
ATGTACCCGG TAGCGGACGT CGCCTTACCA GCAGGGTTTG AATCATTGGC CAAACCCGCC
ACAACGCTGG AATTCACGCC GCAACAAGTG GCAGCACAAC GCCAGGCATG GATTAGCGAA
TGGCAACGCG CCGTCAGCCG TTAA
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| Protein sequence | MLKKYLPLLL LCAAPAFAKP VLTVYTYDSF AADWGPGPAV KKAFEADCNC ELKLVALEDG
VSLLNRLRME GKNSKADVVL GLDNNLLEAA TQTKLFAKSG VANEAVKVPG GWKNDTFVPF
DYGYFAFVYD KSKLKNPPKS LKELVESDQK WRVIYQDPRT STPGLGLLLW MRKVYGDNAP
QAWQKLAAKT VTVTKGWSEA YGLFLKGESD LVLSYTTSPA YHIIEEKKDN YAAANFSEGH
YLQVEVAART VASKQPELAE KFLKFMVSPA FQNAIPTGNW MYPVADVALP AGFESLAKPA
TTLEFTPQQV AAQRQAWISE WQRAVSR
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