| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0111 |
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| Symbol | thiP |
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| ID | 6875403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 119398 |
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| End bp | 121008 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642783364 |
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| Product | thiamine transporter membrane protein |
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| Protein accession | YP_002214058 |
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| Protein GI | 198245222 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
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| TIGRFAM ID | [TIGR01253] thiamine ABC transporter, permease protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACGC GCCGTCAGCC GTTAATTCCC GGCTGGCTGA TTCCGGGGCT GTGCGCCGCC
GCGCTGATGA TAACCGTCTC GCTGGCGGCC TTTCTGGCGC TTTGGCTGAA CGCGCCGTCG
GGCGCGTGGT CGACAATCTG GCGGGATAGC TACCTGTGGC ATGTGGTGCG CTTCTCATTC
TGGCAGGCGT TTCTGTCCGC AGTGCTGTCT GTGGTCCCGG CGGTTTTTCT CGCCCGCGCG
CTTTATCGAC GCCGTTTTCC TGGACGTCTG GCGCTGCTGC GTCTGTGCGC CATGACGCTG
ATTCTGCCGG TACTGGTTGC CGTGTTCGGT ATTCTTAGCG TGTATGGCCG TCAGGGCTGG
CTGGCCTCGC TGTGGCAGAT GCTGGGGCTT CAGTGGACAT TCTCCCCCTA CGGCTTGCAG
GGCATTTTAC TGGCGCACGT CTTTTTTAAC CTGCCAATGG CGAGCCGTTT GTTGCTGCAA
TCTTTGGAAA GCATTCCCGG CGAGCAGCGC CAGCTCGCCG CCCAGCTCGG TATGCGCGGC
TGGCATTTTT TCCGTTTTGT CGAATGGCCG TGGCTGCGCC GCCAAATTCC ACCCGTCGCG
GCGCTGATTT TTATGCTCTG CTTCGCCAGT TTCGCAACGG TTCTGTCGCT CGGCGGCGGC
CCGCAGGCCA CCACTATCGA ACTGGCTATC TTTCAGGCGC TTAGTTATGA CTACGATCCC
GCCCGCGCGG CGATGCTGGC ATTAATCCAG ATGGTCTGCT GCCTGGCGCT GGTACTGCTA
AGCCAACGGC TGAGCAAAGC GATTGCGCCG GGGATGACGC TGACGCAGGG TTGGCGCGAT
CCTGACGATC GTCTCCACAG CCGTCTGACG GACGCCTTAT TAATCGTGCT GGCGCTGCTG
CTGCTGCTTC CGCCGCTGGT CGCCGTGGTG GTCGATGGCG TCAACCGCAG CCTGCCGGAG
GTGCTGGCGC AACCCATTCT GTGGCAGGCT GTCTGGACAT CGCTACGCAT TGCGCTGGCG
GCGGGCGTTC TGTGTGTGGT GCTGACCATG ATGCTACTGT GGAGTAGCCG CGAGCTACGC
CAACGCCAGC AAGTCTTCGC CGGACAAACG CTGGAACTCA GCGGGATGTT GATCCTCGCG
ATGCCGGGGA TCGTGCTGGC GACAGGCTTC TTTTTACTGC TCAATAGCAG CGTTGGCTTA
CCGGAATCCG CCGACGGCAT CGTGATTTTC ACCAATGCGC TGATGGCAAT CCCCTACGCG
CTAAAAGTCC TGGAAAACCC AATGCGCGAT ATTACCGCCC GTTATGGAAT GCTGTGCCAG
TCATTAGGAA TTGAAGGCTG GTCGCGGTTA AAGGTCGTGG AACTGCGGGC GCTGAAACGT
CCGCTGGCGC AGGCGCTGGC GTTTGCCTGC GTACTTTCTA TCGGTGATTT TGGCGTCGTC
GCGCTTTTCG GCAATGACAA TTTCCGCACG CTGCCGTTTT ATCTGTATCA GCAGATCGGC
TCCTACCGCA GCCAGGACGG CGCGGTGACC GCGCTGATAC TGCTGCTGCT CTGCTTTACG
TTATTTACCC TCATAGAGAA ACTACCGGGC CGACATGCTA AAACTGATTG A
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| Protein sequence | MATRRQPLIP GWLIPGLCAA ALMITVSLAA FLALWLNAPS GAWSTIWRDS YLWHVVRFSF
WQAFLSAVLS VVPAVFLARA LYRRRFPGRL ALLRLCAMTL ILPVLVAVFG ILSVYGRQGW
LASLWQMLGL QWTFSPYGLQ GILLAHVFFN LPMASRLLLQ SLESIPGEQR QLAAQLGMRG
WHFFRFVEWP WLRRQIPPVA ALIFMLCFAS FATVLSLGGG PQATTIELAI FQALSYDYDP
ARAAMLALIQ MVCCLALVLL SQRLSKAIAP GMTLTQGWRD PDDRLHSRLT DALLIVLALL
LLLPPLVAVV VDGVNRSLPE VLAQPILWQA VWTSLRIALA AGVLCVVLTM MLLWSSRELR
QRQQVFAGQT LELSGMLILA MPGIVLATGF FLLLNSSVGL PESADGIVIF TNALMAIPYA
LKVLENPMRD ITARYGMLCQ SLGIEGWSRL KVVELRALKR PLAQALAFAC VLSIGDFGVV
ALFGNDNFRT LPFYLYQQIG SYRSQDGAVT ALILLLLCFT LFTLIEKLPG RHAKTD
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