Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0108 |
Symbol | |
ID | 6873341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 116937 |
End bp | 117782 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642783361 |
Product | DNA-binding transcriptional regulator AraC |
Protein accession | YP_002214055 |
Protein GI | 198244573 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAA CGCAAAATGA TCCGCTATTG CCGGGATATT CATTTAATGC CCATCTGGTC GCCGGGCTGA CGCCAATTGA AGCGAATGGA TATCTGGATT TTTTTATCGA TCGTCCGTTG GGCATGAAGG GATATATTCT TAACCTGACC ATCCGCGGAG AGGGCGTCAT TAATAATAAT GGCGAGCAGT TTGTCTGTCG GCCTGGAGAT ATATTATTGT TTCCGCCGGG CGAGATTCAT CACTATGGAC GGCATCCGGA CGCCAGCGAG TGGTATCACC AGTGGGTTTA TTTCCGGCCT CGCGCCTACT GGCAGGAGTG GCTGACCTGG CCGACAATCT TTGCCCAGAC AGGATTTTTC CGCCCGGACG AGGCGCGCCA GCCGCATTTC AGCGAACTGT TCGGGCAGAT CATCAGCGCC GGGCAAGGGG AAGGCCGCTA TTCTGAGCTA CTGGCGATCA ATCTGCTGGA GCAGTTGTTG CTCAGACGTA TGGCGGTAAT TAATGAGTCG TTGCATCCGC CGATGGATAG CCGTGTGCGC GATGCCTGCC AGTATATCAG CGACCATCTG GCGGACAGCC ATTTTGATAT CGCCAGCGTC GCCCAGCATG TCTGCCTGTC GCCCTCCCGG TTATCGCATC TGTTCCGCCA GCAGTTAGGC ATTAGCGTAT TGAGTTGGCG CGAAGATCAG CGTATCAGCC AGGCGAAACT CCTGCTTAGC ACCACGCGAA TGCCGATAGC GACCGTTGGG CGCAATGTTG GATTTGACGA TCAGCTCTAT TTTTCGCGGG TATTTAAAAA ATGCACCGGG GCAAGTCCTA GCGAGTTCAG GGCCGGATGT GAATAA
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Protein sequence | MAETQNDPLL PGYSFNAHLV AGLTPIEANG YLDFFIDRPL GMKGYILNLT IRGEGVINNN GEQFVCRPGD ILLFPPGEIH HYGRHPDASE WYHQWVYFRP RAYWQEWLTW PTIFAQTGFF RPDEARQPHF SELFGQIISA GQGEGRYSEL LAINLLEQLL LRRMAVINES LHPPMDSRVR DACQYISDHL ADSHFDIASV AQHVCLSPSR LSHLFRQQLG ISVLSWREDQ RISQAKLLLS TTRMPIATVG RNVGFDDQLY FSRVFKKCTG ASPSEFRAGC E
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