Gene SeD_A0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0107 
SymbolaraB 
ID6872695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp114888 
End bp116597 
Gene Length1710 bp 
Protein Length569 aa 
Translation table11 
GC content60% 
IMG OID642783360 
Productribulokinase 
Protein accessionYP_002214054 
Protein GI198243987 
COG category[C] Energy production and conversion 
COG ID[COG1069] Ribulose kinase 
TIGRFAM ID[TIGR01234] L-ribulokinase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTG CAATTGGCCT CGATTTTGGC AGTGATTCAG TGCGCGCTCT GGCAGTGGAC 
TGCGCCACCG GCGACGAGAT CGCCACCAGC GTAGAGTGGT ATCCACGCTG GCAAGAAGGC 
CGTTATTGCG ACGGCCCGAA CAACCAGTTC CGTCATCATC CGCGCGACTA CATGGAGTCA 
ATGGAGGCCG CGCTGAAAGC CGTTCTGGCA CAATTAAGCG CCGCGCAACG CGCAAATGTC 
GTTGGCATTG GCGTTGACAG CACCGGTTCT ACGCCAGCGC CGATTGACGC CGACGGTAAC 
GTCCTGGCGC TGCGTCCGGA GTTCGCCGAG AACCCGAATG CGATGTTTGT GCTGTGGAAA 
GATCACACCG CGGTGGAAGA GGCCGACGAA ATCACTCGTC TGTGCCATAA GCCAGGTAAG 
GTCGACTACT CCCGCTATAT TGGCGGCATT TACTCCAGCG AATGGTTCTG GGCGAAGATT 
CTGCACGTCA CCCGCCAGGA TAGCGCCGTC GCGCAGGCCG CCGTCTCGTG GATTGAACTG 
TGTGACTGGG TGCCGGCGCT GCTTTCCGGC ACCACTCGCC CGCAAGATAT CCGCCGTGGC 
CGCTGCAGCG CCGGGCACAA AACACTGTGG CATGAAAGCT GGGGCGGTCT GCCGCCCGCG 
AGCTTCTTTG ATGAACTCGA TCCGTGCATT AACCGTCATC TGCACTACCC GTTATTTAGC 
GAAACCTTCA CCGCCGATCT GCCCGTGGGC ACCCTGTGCG CCGAATGGGC GCAGCGCCTC 
GACTTGCCGG AAAGCGTAGT GATTTCCGGC GGCGCGTTCG ACTGCCACAT GGGCGCGGTC 
GGCGCGGGCG CACAGTCCAA TACGCTGGTA AAAGTCATCG GCACGTCTAC CTGCGACATT 
CTGATTGCGG ATAAACAGAG CGTCGGGGAT CGCGCCGTGA AAGGCATTTG CGGTCAGGTT 
GACGGCAGCG TGGTGCCGAA CTTTATCGGT CTGGAAGCGG GGCAATCTGC TTTCGGCGAC 
ATCTACGCCT GGTTTAGCCG CGTGTTGAGC TGGCCGCTGG AACAACTTGC CGCGCAGCAC 
CCGGAACTGA AAACCCAGAT TAACGCCAGC CAGAAGCAGC TACTGCCAGC GCTCACCGAC 
GCCTGGGCGA AAAATCCGTC CCTGGATCAC CTGCCGGTGG TGCTCGACTG GTTTAACGGT 
CGCCGCACGC CAAACGCTAA TCAGCGTCTG AAAGGCGTCA TTACCGATCT CAATCTCGCC 
ACCGACGCGC CAGCGCTGTT TGGCGGTCTG GTCGCCTCGA CCGCCTTCGG CGCGCGCGCC 
ATTCAGGAGT GTTTTACCGA GCAGGGTATC GCGGTCAATA ACGTGATGGC GCTTGGCGGC 
ATCGCCCGTA AAAATCAGGT CATTATGCAG GTCTGCTGCG ACGTACTGAA TCGTCCGTTG 
CAGATCGTCG CTTCCGACCA GTGTTGCGCA TTAGGCGCCG CTATCTTTGC CGCCGTTGCC 
GCGAAAGTCC ATGCCGATAT TCCTGCCGCC CAGCAAAGCA TGGCGAGCGC GGTAGAACGC 
ACTCTGCGTC CCCGCCCTGA ACAGGCGCAA CGCTTCGAAC GGCTTTACCG CCGCTACCAG 
CAGTGGGCGC TAAGCGCAGA ACAACATTAT CTTCCGACTG CCGCGCCGGC GCCAACGACC 
CCGGCCAATC AGGCAATCCT GACTCATTAA
 
Protein sequence
MAIAIGLDFG SDSVRALAVD CATGDEIATS VEWYPRWQEG RYCDGPNNQF RHHPRDYMES 
MEAALKAVLA QLSAAQRANV VGIGVDSTGS TPAPIDADGN VLALRPEFAE NPNAMFVLWK 
DHTAVEEADE ITRLCHKPGK VDYSRYIGGI YSSEWFWAKI LHVTRQDSAV AQAAVSWIEL 
CDWVPALLSG TTRPQDIRRG RCSAGHKTLW HESWGGLPPA SFFDELDPCI NRHLHYPLFS 
ETFTADLPVG TLCAEWAQRL DLPESVVISG GAFDCHMGAV GAGAQSNTLV KVIGTSTCDI 
LIADKQSVGD RAVKGICGQV DGSVVPNFIG LEAGQSAFGD IYAWFSRVLS WPLEQLAAQH 
PELKTQINAS QKQLLPALTD AWAKNPSLDH LPVVLDWFNG RRTPNANQRL KGVITDLNLA 
TDAPALFGGL VASTAFGARA IQECFTEQGI AVNNVMALGG IARKNQVIMQ VCCDVLNRPL 
QIVASDQCCA LGAAIFAAVA AKVHADIPAA QQSMASAVER TLRPRPEQAQ RFERLYRRYQ 
QWALSAEQHY LPTAAPAPTT PANQAILTH