| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0105 |
|---|
| Symbol | araD |
|---|
| ID | 6871251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 112539 |
|---|
| End bp | 113234 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642783358 |
|---|
| Product | L-ribulose-5-phosphate 4-epimerase |
|---|
| Protein accession | YP_002214052 |
|---|
| Protein GI | 198242714 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
|---|
| TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 69 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGAAG ATCTCAAACG CCAGGTACTG GAAGCCAATC TGGCGCTGCC AAAACACAAC
CTGGTCACCC TTACCTGGGG TAACGTCAGC GCCGTCAATC GCGAACGCGG CGTACTGGTG
ATTAAGCCGT CCGGAGTCGA TTATAGCGTC ATGACCGCTG ACGATATGGT GGTGGTCAGC
CTGGAGACCG GTGAAGTCGT TGAAGGTCAT AAGAAACCGT CGTCCGATAC GCCAACCCAC
CGTCTGTTGT ACCAGGCATT TCCGACTATC GGCGGCATCG TACACACCCA TTCGCGCCAC
GCGACTATCT GGGCGCAGGC GGGTCGGCCG ATTCCGGCGA CGGGAACCAC CCATGCCGAC
TATTTCTACG GTACGATTCC CTGCACTCGC AAAATGACCG AGGCGGAAAT TAATGGCGAG
TATGAATGGG AAACGGGCAA TGTCATTGTT GAAACCTTTG AAAAACAAGG TATTGACGCC
GCTCAAATGC CCGGCGTGCT TGTCCATTCG CACGGCCCGT TTGCCTGGGG TAAAAATGCC
GAGGATGCCG TGCATAACGC CATCGTGCTG GAAGAAGTGG CCTATATGGG GATCTTCTGC
CGCCAGCTTG CGCCGCAGTT GCCCGACATG CAGCAATCCC TGCTGGATAA ACACTATCTA
CGCAAACACG GCGCAAAAGC CTATTACGGG CAGTAA
|
|---|
| Protein sequence | MLEDLKRQVL EANLALPKHN LVTLTWGNVS AVNRERGVLV IKPSGVDYSV MTADDMVVVS
LETGEVVEGH KKPSSDTPTH RLLYQAFPTI GGIVHTHSRH ATIWAQAGRP IPATGTTHAD
YFYGTIPCTR KMTEAEINGE YEWETGNVIV ETFEKQGIDA AQMPGVLVHS HGPFAWGKNA
EDAVHNAIVL EEVAYMGIFC RQLAPQLPDM QQSLLDKHYL RKHGAKAYYG Q
|
|---|
| |