Gene SeD_A0103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0103 
Symbol 
ID6875435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp110976 
End bp111689 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content48% 
IMG OID642783357 
Producthypothetical protein 
Protein accessionYP_002214051 
Protein GI198242615 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.501432 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATAAATA TACGTCAGCA AAAATATCTG ACGCTAAAAG CCATTTTATC GTTAAAATAT 
CCATTACACC CGTCACGGGG AACGAACTCA TTCATGAAAT ATCGCTACAT CATCAGAATC 
GCGGCAGGCA TAATTCTCAT TATGGCTACG GTGTTTATCC ATAATGCCAT CGCTATTTAT 
CAGTTCAGTC AGCAAAACCA GACGCGCGTA GCTGACTGCG CGATTGTCGC AGGAGCAGGC 
GTTAGCGGAA AAACGCCTTC TCCCGTTTTT CAGGCCAGAC TGGATCATGC CATCTGGCTT 
TACCAACAAC ACATTGTCCG CGCGTTGGTA TTAACCGGCG GCTACGGCGC TGGCGCAACG 
GTTTCCGACG CGGCGATAGC CCGTCAATAC GTTCTGGAAA AAGGCATTCC GGCTAAGGCG 
ATTTTTATTG AAGAGCGCTC TACCGTGACG CGCGAAAATA TTCGTTACGC AAAACAGATA 
CTGCGACAAC AACAATGGCG CACAGCGTTA CTGGTCAGCG ATCCGCTGCA TATGCTGCGT 
CTGAAAACTA TCGCTCAGGA TAATGGTATC GATAGCCGCT CATCACCCAC GCGATCCACC 
CGCTATAAAT CCTGGTGGGC GCAAACCCGC TTCTTACTGC GAGAAACTTT TTATTACAGC 
GGATATCGGC TTTTACGTTA TATGCCTGTA CAAAATAACA GTATTACCCC CTAA
 
Protein sequence
MINIRQQKYL TLKAILSLKY PLHPSRGTNS FMKYRYIIRI AAGIILIMAT VFIHNAIAIY 
QFSQQNQTRV ADCAIVAGAG VSGKTPSPVF QARLDHAIWL YQQHIVRALV LTGGYGAGAT 
VSDAAIARQY VLEKGIPAKA IFIEERSTVT RENIRYAKQI LRQQQWRTAL LVSDPLHMLR 
LKTIAQDNGI DSRSSPTRST RYKSWWAQTR FLLRETFYYS GYRLLRYMPV QNNSITP