Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0102 |
Symbol | |
ID | 6874770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 108581 |
End bp | 110932 |
Gene Length | 2352 bp |
Protein Length | 783 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642783356 |
Product | DNA polymerase II |
Protein accession | YP_002214050 |
Protein GI | 198245956 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGCAGG CAGGTTTCAT TTTAACCCGG CACTGGCGGG ATACGCCGCA AGGAACGGAG GTCTCTTTCT GGCTGGCGAC AGACAACGGC CCTGTGCAGG CGACGCTGGC GCCGCAAGAG TCCGTGGCGT TTATTCCGAC CAGCCAGACC TCCCGCGCCG CCTCGCTGCT ACAGGCGGAA AAAGACTATC GCCTGACGCC GCTCCAGCTG CGAGACTTTC ATCGTCAGCC GGTCTCCGGT CTGTATTGCC GTACTCACCG CCAGCTTATG CGGATGGAGA AACTGCTGCG CGAAAACGGC GTCACCGTTT ATGAAGCGGA TGTCCGCCCG CCGGAACGTT ACCTGATGGA ACGTTTTATT ACGTCGCCCG TTTGGGTAGA CGGCGAGATG CGCAACGGCG TTATCCGCAA TGCGCGTCTT AAACCCCACC CCGACTATCG ACCGCCGCTA AAATGGGTCT CGCTGGATAT CGAAACCACG CGACACGGCG AACTGTATTG CATTGGTCTG GAAGGCTGCG GCCAGCGTAC CGTTTATATG CTGGGCCCGG CGAATGGCGA TGACCGCCAA CTGGACTTCG AGCTTGTGTA TGTCGCCAGC CGCCCGCAGC TGCTGGAAAA ACTCAACGCC TGGTTTGCCG AACATGATCC TGACGTCATC ATCGGCTGGA ACGTGGTGCA GTTCGACCTG CGTATGCTGC AAAAACATGC CGAACGCTAC CGTATCCCTT TACGGCTGGG GCGAGACAAT AGCGAACTGG AGTGGCGCGA ACATGGCTTC AAAAACGGCG TTTTTTTCGC CCAGGCCAGA GGGCGAGTCA TTATCGATGG TATCGACGCG CTTAAATCCG CGTTCTGGAA TTTTTCGTCT TTTTCGCTGG AAGCCGTCTC GCAGGAACTG CTCGGCGAAG GAAAATCCAT TGATAATCCC TGGGATCGTA TGGATGAGAT CGATCGCCGC TTTGCCCAGG ATAAACCCGC CCTCGCCACC TACAACCTGA AAGACTGCGA GCTGGTCACG CGCATTTTCC ATAAAACCGA GATCATGCCG TTTTTGCTGG AACGCGCGAC GATCAACGGC CTGCCGGTCG ATCGCCACGG CGGTTCGGTC GCCGCATTCG GGCATCTTTA CTTTCCGCGA ATGCACCGCG CCGGCTATGT CGCGCCCAAT CTCGGCGAAG TGCCGCCGCT GGCAAGTCCC GGCGGCTACG TAATGGATTC ACAACCCGGA TTATACGATT CAGTACTGGT GCTGGATTAT AAAAGCCTGT ACCCGTCGAT TATCCGCACG TTTTTGATTG ATCCCGTCGG GCTGGTCGAA GGCATGGCGC AGCCGGATCC GGAACACAGT ACCGAAGGTT TCCTTGACGC CTGGTTTTCA CGAGAAAAGC ACTGCCTGCC GGAAATTGTT AGCCAAATCT GGCACGGGCG CGATGAAGCC AAACGTCAGG GCAATAAACC GCTCTCGCAG GCGCTTAAAA TCATTATGAA CGCCTTTTAT GGCGTACTCG GCACCACGGC CTGTCGCTTT TTCGATCCCC GTCTGGCGTC GTCAATCACC ATGCGCGGTC ATGCGATTAT GCGCCAGACC AAAGCGCTGA TTGAGGCGCA GGGTTATGAC GTGATTTATG GCGATACCGA TTCCACTTTC GTCTGGCTCC GGCGCGCGCA TTCAGAAGCC GATGCGGCGG AAATCGGGCA CAGGCTGGTG CGTCACGTGA ACGAATGGTG GGCGCAGACG TTACAACAGC AAAATTTGAC CAGCGCGCTG GAGCTGGAGT TTGAAACCCA CTTTTGCCGT TTTCTGATGC CGACCATCCG CGGCGCGGAT ACTGGCAGTA AAAAACGCTA CGCGGGCCTG ATTCAGGAAG GCGACAGCCA GCGCATGGTA TTTAAAGGTC TGGAAACGGT GCGGACCGAC TGGACGCCGC TGGCGCAGCG CTTTCAACAG GAGCTGTATC TGCGCGTTTT TCGCAATGAA CCTTATCAAG ACTATGTGCG CGAGACTATC GATAAACTGA TGGCGGGCGA ACTGGACGCG CAGCTGGTTT ATCGTAAGCG TCTGCGTCGC CCTTTACATG AGTACCAACG TAACGTTCCG CCGCACGTTC GCGCCGCCCG GCTGGCGGAT GAACAAAACC TGAAGCAGGG TCGTCCGACG CAGTATCAGA ATCGCGGCGC CATAAAATAT GTCTGGACTG TTAACGGCCC CGAGCCCGTG GATTACCAGC AGTCGCCGCT GGATTACGAA CACTATCTTA CCCGCCAGCT ACAACCCGTG GCGGAAGGAA TTCTTCCCTT CGTTGAAGAT AATTTTGCTA CACTACTGAC CGGGCAACTG GGGCTATTTT GA
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Protein sequence | MAQAGFILTR HWRDTPQGTE VSFWLATDNG PVQATLAPQE SVAFIPTSQT SRAASLLQAE KDYRLTPLQL RDFHRQPVSG LYCRTHRQLM RMEKLLRENG VTVYEADVRP PERYLMERFI TSPVWVDGEM RNGVIRNARL KPHPDYRPPL KWVSLDIETT RHGELYCIGL EGCGQRTVYM LGPANGDDRQ LDFELVYVAS RPQLLEKLNA WFAEHDPDVI IGWNVVQFDL RMLQKHAERY RIPLRLGRDN SELEWREHGF KNGVFFAQAR GRVIIDGIDA LKSAFWNFSS FSLEAVSQEL LGEGKSIDNP WDRMDEIDRR FAQDKPALAT YNLKDCELVT RIFHKTEIMP FLLERATING LPVDRHGGSV AAFGHLYFPR MHRAGYVAPN LGEVPPLASP GGYVMDSQPG LYDSVLVLDY KSLYPSIIRT FLIDPVGLVE GMAQPDPEHS TEGFLDAWFS REKHCLPEIV SQIWHGRDEA KRQGNKPLSQ ALKIIMNAFY GVLGTTACRF FDPRLASSIT MRGHAIMRQT KALIEAQGYD VIYGDTDSTF VWLRRAHSEA DAAEIGHRLV RHVNEWWAQT LQQQNLTSAL ELEFETHFCR FLMPTIRGAD TGSKKRYAGL IQEGDSQRMV FKGLETVRTD WTPLAQRFQQ ELYLRVFRNE PYQDYVRETI DKLMAGELDA QLVYRKRLRR PLHEYQRNVP PHVRAARLAD EQNLKQGRPT QYQNRGAIKY VWTVNGPEPV DYQQSPLDYE HYLTRQLQPV AEGILPFVED NFATLLTGQL GLF
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