| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0100 |
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| Symbol | |
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| ID | 6872911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 104830 |
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| End bp | 105489 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642783354 |
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| Product | 23S rRNA/tRNA pseudouridine synthase A |
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| Protein accession | YP_002214048 |
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| Protein GI | 198244685 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0729931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 0.810633 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGGATGG AAAACTACAA TCCGCCGCAG GAACCCTGGC TGGTTATCCT GTATCAGGAT
GAGCACATTA TGGTGGTCAA TAAGCCCAGC GGCCTGTTGT CCGTGCCGGG GCGTCTGGAA
GCGCACAAAG ACAGCATTAT GACGCGTATC CAGCGCGACT ACCCGCAGGC AGAGTCGGTG
CATCGTCTGG ATATGGCCAC CAGCGGCGTG ATTGTAGTGG CGCTGACCAA AGCCGCGGAA
CGGGAGCTAA AACGCCAGTT CCGCGAACGG GAGCCGAAAA AGCAGTATGT GGCGCGCGTA
TGGGGGCATC CCTCCCCGGC GGAAGGACTG GTTGACTTAC CGCTCATCTG CGACTGGCCG
AACCGGCCAA AGCAGAAAGT GTGTTATGAA ACCGGCAAAC CGGCGCAAAC GGAATATAAC
GTGGTGGAGT TTGCGGCGGA TAATACCGCC CGCGTGGTGC TCAAGCCGAT CACCGGACGT
TCGCATCAGC TTCGTGTGCA TATGCTGGCG TTAGGCCACC CGATTTTAGG CGATCGGTTT
TACGCCTCGC CGGAAGCGTT GTCACTGGCG CCGCGTTTGC AGTTACACGC CGAAATGCTG
ACCATTACCC ATCCCGCTTA CGGCACCAAC ATGACGTTTA AAGTCCCGGC AGATTTTTAA
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| Protein sequence | MGMENYNPPQ EPWLVILYQD EHIMVVNKPS GLLSVPGRLE AHKDSIMTRI QRDYPQAESV
HRLDMATSGV IVVALTKAAE RELKRQFRER EPKKQYVARV WGHPSPAEGL VDLPLICDWP
NRPKQKVCYE TGKPAQTEYN VVEFAADNTA RVVLKPITGR SHQLRVHMLA LGHPILGDRF
YASPEALSLA PRLQLHAEML TITHPAYGTN MTFKVPADF
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