Gene SeD_A0084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0084 
SymbolfixC 
ID6871557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp90278 
End bp91564 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content56% 
IMG OID642783338 
Productputative oxidoreductase FixC 
Protein accessionYP_002214032 
Protein GI198241975 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAG ATATCTTTGA TGCCATCATC GTGGGTGCAG GTCTGGCCGG TTCGGTTGCG 
GCGCTGGTGC TTGCTCGCGA AGGTGCACAG GTGCTGGTTA TCGAGCGTGG CAATTCTGCT
GGCGCGAAGA ATGTCACCGG TGGGCGCTTG TATGCACATA GCCTGGAACG CATCATTCCC
GGCTTTGCGG ATCAGGCCCC CATTGAACGC ATGATCACCC ACGAAAAACT CGCCTTTATG
ACCGACAAAG GGGCGATGAC GATGGATTAT TGCAACGGCG AGGACGCCGC ATCGTCGCAG
GTTTCTTATT CCGTTTTGCG CAGTAAATTT GACGCCTGGC TGATGGAGCA GGCCGAAGAG
GCGGGGGCGC AACTGATCAC CGGTATTCGC GTGGATAACG TTGTTCAGCG TGATGGCAGA
GTCGTGGGCG TGGAAGCCGA TGGCGATATT CTGGAAGCCA AAGTCGTAAT CCTCGCTGAC
GGGGTGAATT CTCTGCTGGC TGAAAAGCTG GGCATGGCAA AGCGTGTTGA GGCATCGCAT
GTTGCTGTCG GCGTGAAGGA ACTGATCGAA TTGCCGAAGT CGGTCATTGA AGATCGTTTC
CAGTTACAGG GCAACGAAGG TGCCGCCTGT CTGTTTGCCG GGGCGCCAAC CGATGGTCTG
ATGGGCGGTG GCTTCCTGTA TACGAATGAA ACAACCCTTT CCCTGGGGCT GGTCTGCGGT
CTTCATCATC TGAAAGACGC GAAAAAATCG GTCCCGCAAA TGCTGGAAGA TTTCAAACAG
CATCCGGCAG TTGCGCCGCT GATCGCCGGT GGCAAGCTGG TGGAATATGC CGCGCACGTT
GTACCCGAGG CGGGAATGAA TATGCAGCCT GAACTGGTGG GCGATGGCGT GCTGATTGCC
GGAGACGCTG CCGGCATGTG TATGAACCTC GGCTTTACCA TTCGGGGTAT GGATCTCGCC
ATATCCGCAG GCGAAGCGGC GGCGAAGACG GTGCTTTCGG CGATGAAGAG CGACGATTTT
AGCAAGCAGT CGCTGGATGA ATACCGTCAG CATCTGGACG AAGGTCCGAT GCGCGATATG
CGTATGTATC AGAAACTGCC AGCTTTTCTT GATAATCCCC GCATGTTTAC CGCTTATCCC
GAAATGGCGG TCAGTATCGC GCACGACCTG TTCACCGTGG ATGGCTCCGC TCCGGTGCCG
ATGCGTAAAA AAATCCTGCG CCATGCGAAG AAAGTGGGCT TCATCAACCT GATGAAAGAT
GGCCTGAAAG GAGTGACCGT ATTATGA
 
Protein sequence
MSEDIFDAII VGAGLAGSVA ALVLAREGAQ VLVIERGNSA GAKNVTGGRL YAHSLERIIP 
GFADQAPIER MITHEKLAFM TDKGAMTMDY CNGEDAASSQ VSYSVLRSKF DAWLMEQAEE
AGAQLITGIR VDNVVQRDGR VVGVEADGDI LEAKVVILAD GVNSLLAEKL GMAKRVEASH
VAVGVKELIE LPKSVIEDRF QLQGNEGAAC LFAGAPTDGL MGGGFLYTNE TTLSLGLVCG
LHHLKDAKKS VPQMLEDFKQ HPAVAPLIAG GKLVEYAAHV VPEAGMNMQP ELVGDGVLIA
GDAAGMCMNL GFTIRGMDLA ISAGEAAAKT VLSAMKSDDF SKQSLDEYRQ HLDEGPMRDM
RMYQKLPAFL DNPRMFTAYP EMAVSIAHDL FTVDGSAPVP MRKKILRHAK KVGFINLMKD
GLKGVTVL