| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0042 |
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| Symbol | nhaA |
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| ID | 6873545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 46188 |
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| End bp | 47354 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642783300 |
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| Product | pH-dependent sodium/proton antiporter |
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| Protein accession | YP_002213994 |
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| Protein GI | 198245761 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3004] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.975088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.00613874 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAACATC TGCACCGATT TTTTAGCAGC GATGCCTCTG GGGGCATCAT TCTCATCATC
GCCGCTGCGC TGGCTATGCT GATGGCCAAT ATGGGCGCGA CCAGTGGATG GTATCATGAT
TTTCTGGAGA CGCCGGTTCA GCTACGGGTT GGGGCGCTTG AGATCAACAA AAACATGCTG
TTGTGGATCA ACGATGCGCT GATGGCCGTG TTTTTCCTGT TGATTGGCCT GGAAGTTAAG
CGCGAACTGA TGCAAGGCTC GTTAGCCAGT CTGCGCCAGG CCGCTTTTCC GGTGATTGCC
GCCATCGGCG GGATGATTGT ACCGGCATTG CTCTATCTGG CCTTTAACTA CTCCGATCCG
GTCACTCGCG AGGGCTGGGC TATTCCTGCC GCGACGGATA TCGCCTTTGC GCTGGGCGTG
TTGGCGCTGT TGGGCAGCCG GGTTCCGCTG GCGCTGAAAA TTTTCCTGAT GGCGCTGGCG
ATCATCGATG ATCTCGGCGC TATCGTTATT ATCGCACTGT TTTATACCAG CGATCTTTCT
ATCGTCTCGC TGGGCGTGGC GGCGTTCGCG ATTGCCGTGC TGGCGCTGCT GAACCTGTGC
GGCGTCAGAC GGACTGGGGT ATATATTCTG GTCGGGGCAG TGCTGTGGAC GGCGGTACTG
AAGTCCGGCG TTCACGCGAC GCTGGCAGGC GTTATTGTCG GTTTCTTTAT TCCGCTGAAA
GAAAAACACG GTCGCTCGCC GGCCAAGCGT CTGGAGCATG TTCTGCACCC GTGGGTCGCG
TACCTGATCC TGCCGCTTTT CGCTTTTGCG AATGCCGGCG TTTCTCTTCA GGGCGTCACG
ATTGACGGTC TGACCTCCAT GCTGCCGTTG GGAATTATTG CCGGTCTGCT GATTGGTAAG
CCGCTGGGGA TTAGCCTGTT TTGCTGGCTG GCGCTGCGTT TCAAGCTGGC GCATCTGCCG
CAGGGGACCA CTTATCAGCA AATCATGGCG GTCGGCATTT TGTGTGGCAT TGGCTTTACG
ATGTCCATCT TTATCGCCAG CCTGGCATTT GGCAATGTCG ATCCGGAACT TATTAACTGG
GCGAAATTGG GCATTTTGAT TGGTTCATTG CTCTCCGCAG TGGTGGGGTA TAGCTGGTTG
CGCGCGCGTT TGAACGCGCC GGCATAA
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| Protein sequence | MKHLHRFFSS DASGGIILII AAALAMLMAN MGATSGWYHD FLETPVQLRV GALEINKNML
LWINDALMAV FFLLIGLEVK RELMQGSLAS LRQAAFPVIA AIGGMIVPAL LYLAFNYSDP
VTREGWAIPA ATDIAFALGV LALLGSRVPL ALKIFLMALA IIDDLGAIVI IALFYTSDLS
IVSLGVAAFA IAVLALLNLC GVRRTGVYIL VGAVLWTAVL KSGVHATLAG VIVGFFIPLK
EKHGRSPAKR LEHVLHPWVA YLILPLFAFA NAGVSLQGVT IDGLTSMLPL GIIAGLLIGK
PLGISLFCWL ALRFKLAHLP QGTTYQQIMA VGILCGIGFT MSIFIASLAF GNVDPELINW
AKLGILIGSL LSAVVGYSWL RARLNAPA
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