Gene SeD_A0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0038 
Symbol 
ID6871417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp40129 
End bp41622 
Gene Length1494 bp 
Protein Length497 aa 
Translation table11 
GC content53% 
IMG OID642783296 
Productsulfatase 
Protein accessionYP_002213990 
Protein GI198243820 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3119] Arylsulfatase A and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.292867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.00560398 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAGAA CAGTCGTTGC CAGTATGATA GGGTTGGCGC TATGCGCTGG ATGCGTATTA 
TCAACCGCGC AAGCGGCAAC CGCAAAGCGT CCTAACTTAG TCATTATTCT GGCGGATGAT 
TTAGGGTATG GCGATCTCGC CACCTACGGG CACCGCATCG TTAAAACACC TAACATAGAC 
AAATTGGCGC AGGAGGGGGT GAAGTTTACC GACTATTATG CGCCAGCGCC TCTGTGTTCT 
CCTTCCCGCG CGGGCCTGTT AACCGGTCGT ATGCCGTTCC GTACCGGAAT CCGTTCCTGG 
ATACCGGAAG GCAAAGATGT TGCGCTGGGG CGTAATGAAC TGACTATCGC CAATCTGCTA 
AAACAGCAGG GCTACGATAC AGCGATGATG GGGAAATTAC ACCTGAATGC GGGCGGCGAT 
CGCACCGATC AGCCGCAGGC GAAAGACATG GGCTTTGACT ATACGTTGGT TAATCCGGCG 
GGATTTGTCA CCGATGCTAC GCTGGATAAC GCCAAGGAGC GCCCGCGCTA TGGCGTGGTG 
CATCCTACGG GGTGGATTCG TAATGGCCAA CATATTGGCC GCGCAGATAA GATGAGCGGC 
GAGTTTGTGA GCTCTGAAGT GGTGAACTGG CTGGATAATA AGAAAGACGA TAATCCGTTC 
TTCTTATATG TCGCCTTTAC CGAAGTCCAT AGCCCGCTGG CGTCGCCGAA AAAATACCTT 
GATATGTATT CGCAGTACAT GACCGACTAC CAGAAGCAGC ATCCGGATCT GTTCTACGGC 
GACTGGGCAG ACAAACCGTG GCGCGGCACC GGCGAATATT ACGCCAATAT CAGCTACATG 
GATGAGCAGG TCGGTAAAGT GCTGGATAAA ATTAAGGCGA TGGGCGAGGA AGATAACACC 
ATCGTCATCT TTACCAGCGA CAACGGCCCT GTCACGCGCG AAGCGCGTAA GGTATACGAG 
CTGAACCTGG CCGGGGAAAC CGACGGTCTG CGCGGGCGTA AAGACAACCT GTGGGAAGGC 
GGCATTCGCG TACCGGCAAT CATCAAATAC GGCAAGCACA TTCCACAGGG GATGGTAACG 
GACACGCCGG TATATGGTCT TGACTGGTTG CCGACGCTGG CCAACATGAT GGACTTTAAA 
CTCCCGACCG ATCGTACCTA CGACGGTCAG TCTTTAGTTC CGCTCCTGAA GGACAAGACG 
TTAAAACGCC AGAAACCGCT GATCTTCGGT ATCGATATGC CGTTCCAGGA CGATCCGACG 
GATGAGTGGG CGATCCGCGA CGGCGACTGG AAGATGATCA TCGATCGCCA GAGTAAACCT 
AAATATCTCT ATAACCTGAA AACCGATCGT TTCGAGACGC TCAATCAAAT TGGTAAACAG 
CCGCAGATTG AGAAACAGCT TTACGGTAAG TTCCTGAAGT ATAAAAAGGA TATTGATAAC 
GATTCGCTGA TGAAAGCCCG TGGCGATAAG CCGACGCCTG TCACCTGGGG CTAA
 
Protein sequence
MKRTVVASMI GLALCAGCVL STAQAATAKR PNLVIILADD LGYGDLATYG HRIVKTPNID 
KLAQEGVKFT DYYAPAPLCS PSRAGLLTGR MPFRTGIRSW IPEGKDVALG RNELTIANLL 
KQQGYDTAMM GKLHLNAGGD RTDQPQAKDM GFDYTLVNPA GFVTDATLDN AKERPRYGVV 
HPTGWIRNGQ HIGRADKMSG EFVSSEVVNW LDNKKDDNPF FLYVAFTEVH SPLASPKKYL 
DMYSQYMTDY QKQHPDLFYG DWADKPWRGT GEYYANISYM DEQVGKVLDK IKAMGEEDNT 
IVIFTSDNGP VTREARKVYE LNLAGETDGL RGRKDNLWEG GIRVPAIIKY GKHIPQGMVT 
DTPVYGLDWL PTLANMMDFK LPTDRTYDGQ SLVPLLKDKT LKRQKPLIFG IDMPFQDDPT 
DEWAIRDGDW KMIIDRQSKP KYLYNLKTDR FETLNQIGKQ PQIEKQLYGK FLKYKKDIDN 
DSLMKARGDK PTPVTWG