Gene SeD_A0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0010 
Symbol 
ID6875470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp10092 
End bp10805 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content54% 
IMG OID642783270 
Producthypothetical protein 
Protein accessionYP_002213964 
Protein GI198243756 
COG category[S] Function unknown 
COG ID[COG4735] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0398298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCA CTTATTTACA CGACGAGGAT TTAGACTTTC TTCAGCATTG TAGCGAAGAA 
CAACTCGCCG ATTTCGCCCG TTTGCTGACG CATAACGAAA AGGGCAAGGC TCGCTTGTCA 
AGCGTCCTTA GTCATAACGA GCTGTTCAAA GCGATGGAAG GTCACCCGGA GCAACACCGC 
CGTAACTGGC AGCTCATTGC CGGCGAGTTT CAGCATTACG GCGGCGACAG TATCGCCAAC 
AAATTGCGCG GGCACGGAAA ACAGTACCGC GCGATTCTGC TGGATGTCGC AAAACGGCTA 
AAACTCAAAG CAGATAAAAG CATGTCGACG TTTGAAATAG AACAGCAACT GCTGGAGCAT 
TTTTTACGTC ATACCTGGCA GAAGATGGAC GCGGCGCATA AGCAGGAATT TCTGCAAGCC 
GTAGACGCCA AAGTTTCTGA ACTGGAAGAA CTGCTGCCGC TGCTCATGAA AGATCGCAGT 
CTGGCAAAAG GGGTCTCCCA CCTGCTTTCC ACCCAGCTTA CCCGCATTTT GCGTACCCAT 
GCCGCAATGA GCATCCTGGG CCACGGATTG CTGCGCGGCG CAGGTCTTGG CGGCCCGGTC 
GGCGCGGCGT TAAACGGCGT CAAAGCGATG AGCGGCAGCG CGTATCGCGT GACTATTCCG 
GCAGTGTTGC AAATAGCCTG CCTGCGACGA ATGATGGCAG CCGTTCAGGC GTGA
 
Protein sequence
MNVTYLHDED LDFLQHCSEE QLADFARLLT HNEKGKARLS SVLSHNELFK AMEGHPEQHR 
RNWQLIAGEF QHYGGDSIAN KLRGHGKQYR AILLDVAKRL KLKADKSMST FEIEQQLLEH 
FLRHTWQKMD AAHKQEFLQA VDAKVSELEE LLPLLMKDRS LAKGVSHLLS TQLTRILRTH 
AAMSILGHGL LRGAGLGGPV GAALNGVKAM SGSAYRVTIP AVLQIACLRR MMAAVQA