Gene SeD_A0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0009 
Symbol 
ID6874161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp9376 
End bp9942 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content54% 
IMG OID642783269 
Producthypothetical protein 
Protein accessionYP_002213963 
Protein GI198245990 
COG category[S] Function unknown 
COG ID[COG1584] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.396236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAACA CTAAGTTGGC TAATCCGGCA CCGCTGGGCC TGATGGGCTT CGGCATGACC 
ACCATTCTGC TTAACCTGCA CAATGCCGGT TTTTTCGCCC TGGACGGTAT TATTCTGGCG
ATGGGGATTT TCTACGGCGG TATCGCGCAA ATTTTTGCCG GTCTGCTGGA GTACAAAAAA
GGCAATACCT TTGGTTTAAC GGCCTTTACC TCTTACGGTT CGTTCTGGCT GACGCTGGTC
GCTATCCTGC TGATGCCGAA AATGGGCCTG ACGGATGCGC CTGACGCTCA GCTACTCGGC
GCTTATTTAG GTCTGTGGGG CGTGTTCACG CTGTTTATGT TCTTCGGTAC GCTGAAAGCC
GCCCGCGCGC TGCAATTTGT TTTCCTGAGC CTGACCGTAC TGTTCGCTCT GCTGGCGGTC
GGCAATATCA CCGGTAACGA AGCCATTATC CATATCGCAG GCTGGGTTGG TCTGGTTTGC
GGCGCCAGCG CTATTTATCT GGCGATGGGT GAAGTGCTAA ACGAGCAATT TGGCCGCACT
ATTCTGCCAA TCGGCGAGGC GCACTAA
 
Protein sequence
MGNTKLANPA PLGLMGFGMT TILLNLHNAG FFALDGIILA MGIFYGGIAQ IFAGLLEYKK 
GNTFGLTAFT SYGSFWLTLV AILLMPKMGL TDAPDAQLLG AYLGLWGVFT LFMFFGTLKA
ARALQFVFLS LTVLFALLAV GNITGNEAII HIAGWVGLVC GASAIYLAMG EVLNEQFGRT
ILPIGEAH