Gene SeD_A0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0005 
Symbol 
ID6871642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp5114 
End bp5887 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content50% 
IMG OID642783265 
Producthypothetical protein 
Protein accessionYP_002213959 
Protein GI198242886 
COG category[S] Function unknown 
COG ID[COG3022] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATTC TGATTTCACC TGCAAAAACG CTTGATTATC AAAGCCCGCT GGCCACGACC 
CGCTATACCC AGCCGGAGCT ATTGGATCAC AGCCAGCAGC TTATTCAACA GGCCCGCCAG 
CTTTCGGCGC CGCAAATTTC CAGGCTGATG GGAATTAGCG ACAAACTGGC GGATCTCAAC 
GCCACGCGTT TTCATGACTG GCAGCCTCAT TTTACGCCGG ATAATGCACG CCAGGCGATT 
CTGGCGTTCA AAGGCGATGT TTATACTGGC CTACAGGCGG AAACGTTCAA CGACGCGGAT 
TTTGATTTTG CTCAACAACA TCTGCGTATG CTCTCTGGCT TGTATGGCGT ATTGCGCCCG 
CTGGATTTAA TGCAGCCTTA TCGTCTGGAG ATGGGGATTC GCCTGGAGAA TCCGCGCGGC 
AAAGATCTTT ATCAATTCTG GGGCGATATC ATTACCGATA AGCTCAACGA AGCGCTTGAA 
GCGCAGGGCG ATCGGGTGGT AGTGAATCTG GCCTCCGAGG AATATTTTAA ATCGGTGAAG 
CCGAAGAAAC TGAATGCCGA ACTGATTAAG CCCGTGTTCC TTGATGAGAA AAACGGCAAG 
TTTAAGGTGG TAAGCTTCTA CGCCAAAAAA GCGCGCGGAC TGATGAGCCG TTTTATTATT 
GAAAACCGCT TAACGAAGCC GGAACAGCTT ACCGCGTTTG ACCGTGAAGG GTATTTCTTT 
GATGAAGAAA CCTCCACACA AGACGAGCTG GTCTTTAAAC GCTACGAGCA GTAA
 
Protein sequence
MLILISPAKT LDYQSPLATT RYTQPELLDH SQQLIQQARQ LSAPQISRLM GISDKLADLN 
ATRFHDWQPH FTPDNARQAI LAFKGDVYTG LQAETFNDAD FDFAQQHLRM LSGLYGVLRP 
LDLMQPYRLE MGIRLENPRG KDLYQFWGDI ITDKLNEALE AQGDRVVVNL ASEEYFKSVK 
PKKLNAELIK PVFLDEKNGK FKVVSFYAKK ARGLMSRFII ENRLTKPEQL TAFDREGYFF 
DEETSTQDEL VFKRYEQ