Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0003 |
Symbol | thrB |
ID | 6873732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 2801 |
End bp | 3730 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642783263 |
Product | homoserine kinase |
Protein accession | YP_002213957 |
Protein GI | 198244850 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0083] Homoserine kinase |
TIGRFAM ID | [TIGR00191] homoserine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGAAAG TGTATGCCCC GGCTTCCAGC GCGAACATGA GCGTCGGTTT CGACGTGTTG GGCGCAGCCG TCACACCCGT TGACGGCACG TTGCTGGGCG ATGTGGTATC CGTTGAAGCA GCGAACCATT TCCGTCTGCA TAACCTGGGG CGATTTGCCG ATAAACTGCC GCCGGAGCCG CGTGAAAATA TTGTTTATCA GTGCTGGGAA CGTTTTTGCC AGGCATTGGG GAAAACCATC CCGGTGGCGA TGACGCTGGA AAAAAATATG CCGATTGGTT CCGGGTTAGG GTCCAGCGCC TGTTCCGTCG TCGCCGCGCT GGTCGCGATG AATGAGCACT GCGGCAAACC GTTAAACGAC ACGCGTCTGT TGGCGCTGAT GGGCGAGCTG GAAGGCCGTA TCTCCGGCAG CATCCATTAC GATAACGTCG CGCCGTGCTT TCTTGGCGGT ATGCAGCTGA TGATTGAAGA AAACGGCATT ATTAGTCAGC AGGTGCCGGG TTTTGATGAG TGGCTATGGG TACTGGCTTA TCCGGGCATT AAAGTTTCCA CCGCAGAAGC ACGGGCCATT TTGCCTGCGC AGTATCGCCG TCAGGATTGC ATTGCGCATG GACGGCATCT GGCCGGTTTT ATTCACGCCT GTTACTCGCG GCAGCCGCAG CTTGCCGCCG CGCTGATGAA AGATGTTATT GCCGAACCAT ACCGCGCGCG TTTACTGCCG GGCTTTAGCC AGGCGCGGCA GGCGGTATCG GAGATCGGCG CGCTGGCGAG CGGGATTTCC GGGTCGGGGC CGACGCTGTT TGCGCTATGC GATAAACCTG AGACGGCGCA GCGCGTCGCG GACTGGCTGA GCAAACATTA TCTGCAAAAT CAGGAAGGCT TCGTTCATAT TTGCCGGCTG GATACGGCGG GCGCACGAGT AGTGGGATAA
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Protein sequence | MVKVYAPASS ANMSVGFDVL GAAVTPVDGT LLGDVVSVEA ANHFRLHNLG RFADKLPPEP RENIVYQCWE RFCQALGKTI PVAMTLEKNM PIGSGLGSSA CSVVAALVAM NEHCGKPLND TRLLALMGEL EGRISGSIHY DNVAPCFLGG MQLMIEENGI ISQQVPGFDE WLWVLAYPGI KVSTAEARAI LPAQYRRQDC IAHGRHLAGF IHACYSRQPQ LAAALMKDVI AEPYRARLLP GFSQARQAVS EIGALASGIS GSGPTLFALC DKPETAQRVA DWLSKHYLQN QEGFVHICRL DTAGARVVG
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