Gene SeD_B0120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_B0120 
Symbol 
ID6870848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011204 
Strand+ 
Start bp70977 
End bp71813 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content36% 
IMG OID642783256 
ProductPI protein 
Protein accessionYP_002213950 
Protein GI198241649 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00157188 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones96 
Fosmid unclonability p-value0.651101 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTAC TGAGCGTTAC AAAGAAAACA AAAATTCGCC ACAGAAATGA AATTAACAGC 
ACATTCTCAT CGTTGCCTTT GTCTGCCAGA AGAATTTTGT TTATGGCTAT GGCGCAGATT 
GATTCACGTG AAGAGTTATC TGAGGGAGCA ACCTTTCGTA TTACGGCTCG GGAATATGCA 
TTTATCGCTG ATATTGATGT AACAGGTGCT TACCGGCAGT TAAAAGAGGG GGCAGAAGAA 
CTTCAGGCCA GTGTTATTCG CATTCCGCGA AATCAACTTC TCACAGCTCA GGGCAATCAA 
AGCTCTGGAC ATACGAAGAA GAGAGGTAAA TTACCTTCTG ATGCAGTCAG GCTTATGAAC 
TTGACTGCGT TTTGTGATTA TGTTGAAAGT GAAGGATATA TTGATATTGC TTTTTCACAT 
GTCATTGAGC CATATATCAC GATGTTAAAG GATTCTTACA CTACTCAGGT TTTGATATCG 
TCTGTAAGAC TCGCTGATCA AAATTCAAAT ATGCTTTATC AGTTTATCAG GAAACAATAC 
AGCAGTGGTA AAAAGACATT TTTCGACATT GAAGTAGATG TATTAAAGGA TGAACTTGAA 
TTATTCAGAA TAGATAATGG CGAAAAAGTT TACCTTTATC AGAATTTTAA GGACTTTAAT 
AAAGTTTTTC TGCAAAAAAA CATTGAAAAA ATAAATCAAT ATACAGAGAT TAATCATCTC 
GAAGTTAGAA TCGTTGAGAG AGTCGCAAGA AGAGCATCCA AGCTAAGGTT TTCTTATAAA 
ATAGATAAAG AAAGTGAAGG CCTAGATATC AGAATACCAT ACGGTTTCAG AGGATAA
 
Protein sequence
MNLLSVTKKT KIRHRNEINS TFSSLPLSAR RILFMAMAQI DSREELSEGA TFRITAREYA 
FIADIDVTGA YRQLKEGAEE LQASVIRIPR NQLLTAQGNQ SSGHTKKRGK LPSDAVRLMN 
LTAFCDYVES EGYIDIAFSH VIEPYITMLK DSYTTQVLIS SVRLADQNSN MLYQFIRKQY 
SSGKKTFFDI EVDVLKDELE LFRIDNGEKV YLYQNFKDFN KVFLQKNIEK INQYTEINHL 
EVRIVERVAR RASKLRFSYK IDKESEGLDI RIPYGFRG