Gene SeD_B0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_B0116 
Symbol 
ID6870936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011204 
Strand- 
Start bp69512 
End bp69763 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content47% 
IMG OID642783252 
Productputative stability protein StbD 
Protein accessionYP_002213946 
Protein GI198241720 
COG category 
COG ID 
TIGRFAM ID[TIGR01552] prevent-host-death family protein 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.000696013 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones99 
Fosmid unclonability p-value0.795005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTATC AAATTCTGAC AACCACAGCG GCCAGTATTA CTGACCTGAA AAAAAATCCT 
ATGGGAACCG TAGCTGAAGG TGAAGGGGAC GCTGTTGCGA TCCTGAACCG AAACGAACCG 
GCGTTCTATT GCGTTCCACC AAAACTTTAC GCCTACTATC GGGAACTCGC TGAAGATGCT 
GAGTTAAACG CTGTTGCTGA TGAGCGCATG AAAAACCCGG AAATTGTGAA GGTTAACCTG 
GATGACCTAT GA
 
Protein sequence
MSYQILTTTA ASITDLKKNP MGTVAEGEGD AVAILNRNEP AFYCVPPKLY AYYRELAEDA 
ELNAVADERM KNPEIVKVNL DDL