Gene SeD_B0104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_B0104 
Symbol 
ID6870884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011204 
Strand- 
Start bp63388 
End bp64035 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content38% 
IMG OID642783240 
Productpilx1 protein 
Protein accessionYP_002213934 
Protein GI198241677 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones97 
Fosmid unclonability p-value0.718662 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATCTA CTTCTACTTT TCTTGCGCTT GCCATGCAAT GCGCTGCCAG CGTTCATCCT 
GACACAACGC ACGAAGTCGC CAGGGTTGAA TCAGGTTTTA ACCCATATGC GATTGCGGAA 
ATAATACCAA AGGTTAAACG CAAACCTGGT GATAAAGGCG TAGTATCTTA CTTTCCAGAA 
TCAAAGGAGG CAGCACTTAA GATCGTTAAA AACATTGAAT TACGGAATCA TCGTTACTCT 
GTAGGACTTA TGCAAATAAC AAGTACCAAT TTTGCAAAGT TCGGCACAAC AGCAGAGAAA 
ATGTTTGATC CATGCGAAAA TCTTAAGGTA TCAGAAAAAA TACTGGTTGA CTGTTATAAA 
CGAGGTGGCG ACTTAGTGCG TGGTCTGAGT TGCTATTATT CCGGCAATCC AGAAACAGGA 
GTAAAGCCAG AACCTGAATT TAATAATACA AGTTATGTAC AACGTATAGG ATTTAGCCCT 
CCTGATAATA AAAAAATTTT TATTGTTCCC TCTGTAAAGG AAATGATTAA AAAGGAGAAT 
AAGACGACTA TCACACCTGA AGAAATCATT ATATATCCTC AATACGCCAT GCGTGGCACT 
GTATCAAATG AAAAGGAAAC AAAAGATGTT GAAATTAAAT CTGAATAA
 
Protein sequence
MLSTSTFLAL AMQCAASVHP DTTHEVARVE SGFNPYAIAE IIPKVKRKPG DKGVVSYFPE 
SKEAALKIVK NIELRNHRYS VGLMQITSTN FAKFGTTAEK MFDPCENLKV SEKILVDCYK 
RGGDLVRGLS CYYSGNPETG VKPEPEFNNT SYVQRIGFSP PDNKKIFIVP SVKEMIKKEN 
KTTITPEEII IYPQYAMRGT VSNEKETKDV EIKSE