Gene SeD_B0101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_B0101 
Symbol 
ID6870871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011204 
Strand- 
Start bp59573 
End bp60331 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content45% 
IMG OID642783237 
Productpilx5 protein 
Protein accessionYP_002213931 
Protein GI198241710 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.265496 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones100 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGC AAATTATGGC GGCATTCGTC GCTTCACTGA TTGTTATTTC CGGCGCTCAG 
GCAGGGATAC CTGTTGCCAT CGACGCCAAC CCTGAATGGG CGATTGAAGC CGGACGATGG 
ACAGAACGCC TTAAGCAATG GGCAGAAACG GTGAAACATT ACGAAAATCA GATAAATGCG 
TACAAACAGG AGCTGCTGTC AAAAACGGGT ATCCGTGATG TGCAGGGACT GGTGCAGTCC 
GCACAGTCAG TGAGTAAGGA GCTGATGCAG ATTTATGATC AGGGGAATGC TTTTATTGAC 
GATTACATTA AAAATCCTGA AAGTGCGTTA TCGGAACAGG CCAAATCGTT ATTGTCAGAT 
TACAGGGTAA CAGATACCTG TCATAACCTG GGATATTCCG GTGACCTGGT ACGGGGATGT 
GAAGCGACGT TCCTTTCTCA ACTGGCAAGC GTGGAATACG GTAACAAGCT GGAGAGCAAG 
CTTCGTCAGG ACAACCAGAC GATGAAAGAC CTTATTGATC AAGTCAAAAA TGCGAAGGAT 
ACGAAGGCCA CGCAGGATGC AACAAACGCT GTTGCACTTG AACAACTGAA GTTCGAGAAG 
CTCAAATTTC AGTATCAAAT GTATCGCGAT AAGCAACGAG ATCTTGCAGA ATATAAAGAG 
AAGATGGCTC AGGCTTCTTT CAGAAAACAG CAACGTGAAG CCGTGCCTCC TTCTTACAGA 
AAAGCTTATA TGGCAATGAA ATCATATGAG GATGATTAA
 
Protein sequence
MKKQIMAAFV ASLIVISGAQ AGIPVAIDAN PEWAIEAGRW TERLKQWAET VKHYENQINA 
YKQELLSKTG IRDVQGLVQS AQSVSKELMQ IYDQGNAFID DYIKNPESAL SEQAKSLLSD 
YRVTDTCHNL GYSGDLVRGC EATFLSQLAS VEYGNKLESK LRQDNQTMKD LIDQVKNAKD 
TKATQDATNA VALEQLKFEK LKFQYQMYRD KQRDLAEYKE KMAQASFRKQ QREAVPPSYR 
KAYMAMKSYE DD