Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_B0096 |
Symbol | |
ID | 6870850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011204 |
Strand | - |
Start bp | 56310 |
End bp | 57239 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642783232 |
Product | pilx9 protein |
Protein accession | YP_002213926 |
Protein GI | 198241736 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | [TIGR02781] P-type conjugative transfer protein VirB9 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.164234 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 93 |
Fosmid unclonability p-value | 0.522922 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATGA ATAAAGGAGC GTTAATTATG GCGCTTCTGA TGGCGGCGCA CGTCTGTAAT GCTGCTGTTC TTCCTTCAGG CAGTCGCTTT GACCCACGCA ATCAGATAGT CAGTTATAAC CCCAATAATA CCACCATAAT TAACAGTGCC GTTGGATACA CCACCACACT GGTATTTGAT GAAGATGAAA CAGTTATCAG TGCCAGAACC GGTTTTCCGC AGGGATGGGC GGTTAATAAA GAAGATAACC TGGTATACCT GGAAGTTCGT CCTGTTAAAC AAACTGTTCA GAAAAATAAT ACGGATGCAA ACGGTAACAC CTCTTCTGAA TCCGTCAGTG TTGCTCTTGA CCCGGAAAAT GAGCTTGAAC GCTGGCGAAT GAATCTGTTT GTTCGCACCA CGAAACGTAA TTACAGCATG GAGCTGAACG CCAGAACGTT CCGACAGCCG GAGAAAATTG CGTTTGTGGT GAATTACCAG TATCCGCAGG AACGCCGGAA GGAACAGGCC GAAATTGAGA AGAAACGCAC AGAGGCTCTT GCCAGACGCC TGGAGGAACA GGCAATCAAC CGTTCCCTGG AAAATGCGAA ATCGCCCCGT AACTGGCAGT ACTGGAAGCG GGTTGCTGAA GGCAGCCAGG ATATCAGCCC TGATTATGCA TATGACGATG GTCGTTATAC CTGGTTCGGC TTCAGTCCGT TAAAGAAAAT TCCCAGCGTC TTTGTGATGA ACGGTATGCA GGAGACTCTT ACCAATCCTG TGATTAAACA GAGCGGGAGT TTTACGGCTG TTGGCGTACC GGTTGATAAG CGTTTTGTTT TACGTCTTGG TGAGCAGGTG GTGGGGATTG AGAACCTGGG CTTCGGAAAA GTACGTTTAC CAGCCGGAGA TACGGTATCC CCGGATGTTA AGAAAGAGGT GATCCAGTGA
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Protein sequence | MKMNKGALIM ALLMAAHVCN AAVLPSGSRF DPRNQIVSYN PNNTTIINSA VGYTTTLVFD EDETVISART GFPQGWAVNK EDNLVYLEVR PVKQTVQKNN TDANGNTSSE SVSVALDPEN ELERWRMNLF VRTTKRNYSM ELNARTFRQP EKIAFVVNYQ YPQERRKEQA EIEKKRTEAL ARRLEEQAIN RSLENAKSPR NWQYWKRVAE GSQDISPDYA YDDGRYTWFG FSPLKKIPSV FVMNGMQETL TNPVIKQSGS FTAVGVPVDK RFVLRLGEQV VGIENLGFGK VRLPAGDTVS PDVKKEVIQ
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