Gene SeD_B0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_B0088 
Symbol 
ID6870932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011204 
Strand- 
Start bp50643 
End bp51218 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content37% 
IMG OID642783226 
Producthypothetical protein 
Protein accessionYP_002213920 
Protein GI198241665 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.948002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones93 
Fosmid unclonability p-value0.424397 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATATG CATTATTTGA TGGGATGGAA CGAAAGTTTT TGCTGGATGC TCTTGAATTT 
GGTGTCCTGA AGGACTGGAA AGAAAATCAG GTAAAAGAAC TTCCTGATAT TGATGAATTT 
GTTCACCCCT TCCATGTCTG TTATGGTGGA TATTTATTAA ACCCTGATGT TTCAGATTTA 
GATATTAGCA GAAAAATAAA AGATCAGACA GGATTCTGGC TGGCAGCTAT TGATGATACC 
CGCATGGATT GTCATTCAAT AGCTTATTAT GATATTCACA CCCTCCCTTT AATTTCGTGT 
GGTCATCAGA AGATAGTTCC TTTTGCAGCG TTAATAAAAG CTGATGAATG CATCATTTCA 
AAAATTGCTT CGTATTCTGG TTTTGCCGTA ACAGCCTTTT TGAGAATTAA AGACCAGGAT 
ATCGCAACGA ATATACTTAA CCGTGAGGGG ATTTTTGCTT TTAATGGCTG TGAACGCAGA 
TTCAGACATC CAGTAAGTGA AGATAACTGG CAACAGGTAA TATCAGAAGA ACGTGCTATC 
CGTTGTGCAA AAAGATTAAT TCAATGTAAA GGATAA
 
Protein sequence
MQYALFDGME RKFLLDALEF GVLKDWKENQ VKELPDIDEF VHPFHVCYGG YLLNPDVSDL 
DISRKIKDQT GFWLAAIDDT RMDCHSIAYY DIHTLPLISC GHQKIVPFAA LIKADECIIS 
KIASYSGFAV TAFLRIKDQD IATNILNREG IFAFNGCERR FRHPVSEDNW QQVISEERAI 
RCAKRLIQCK G