Gene SeD_B0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_B0081 
Symbol 
ID6870931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011204 
Strand+ 
Start bp45398 
End bp46525 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content42% 
IMG OID642783221 
Producthypothetical protein 
Protein accessionYP_002213915 
Protein GI198241661 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.367991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones95 
Fosmid unclonability p-value0.652875 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATTA CGGCCTACTC CAAAACGTTC AAGCGTGAAC TTGATGCCAG GCAGTTGAAA 
AATCTTTTTG ATGAAAATAA TGCCGATTCA GCGCTGAGTT TCCGGGATTT TGTGAAAGCA 
GATATTGAAT GCCCAGCCTG CAATGTTTCT GGCGGTCATT ATGTTGCAGA AGCTAAATCG 
CAGTCGAAAG GCAATGTTGT AAAGCAGGCT CATTTTGCAT TTCGCGACAG CCAAGGAAAA 
GATACTCATC TTCCTTTCTG TGATTTTTAC ACTGGTTCAG ACAAGCTAAA TGTCGTTTCT 
AACGACGGGC GTGTTGATTT CATGCGTTCT GGCTCTGAAG CCACGCAACT GATCGGCTTA 
ATGGTCTGTG CCGGGATTGA AGCCAATATA TTCACTCAGC AAGACATTCG GAACATGCGA 
CAATGGTTCC TAGACTTGCG TGAGCAAGGT TCGTTTATCT TCAATCTGAA TCCACATATC 
GTACAGATTG CCAGAGCTTC TCTGATAAGA AACAAAAGAA ATAGAGATCA ATACATTGTT 
GATATCAGTG AAACCAAGAA TAGTTGGTTT GATATTGATA ATGAAGTCTA CCAGTCGCTT 
TACTTCAAGT TTCCCGAGTT GGCTTTGGAT CATCGGGATA ATCCCGAACT ATGGGGGATA 
AGGCTTAAAG GGGTTGTCAC TAAAGCTAAA AGCATTATTG TGAAGGACTC GGGTACATCC 
ACATTTGATA GGTCAATCCT TTCTGAAAAA TATCAGTTGG CAACACAAAT TGCATCACTG 
GTTAGAAGTA CTCATCCACG GCTACGCGTA CTGTTAGGAT ACACAACCAA CGCTCTGAGG 
AGTAGCAATC CACTGATGGC ATTTGCAGCG CTTCTGCTGT TTGTATCTGA TTGGGATGTT 
ACAGTCGCTG AAAAGAAGAT TAAAGCGATA TTGGCCGTAG AAACAGTGAC TGACATTACC 
GCTGGTAATG TGGTTGGCAT GAACCCTTTT ATCCATTATA GCGCGTGGAT CTTGGTTAAA 
GCCCTGCATG AACTACAATC TGAGCTGGGG TACGAAGTTG ATTTTGACGC TGAGTTTAAC 
TTCGAAAAAG AAAGACTGAT GAAACTATAT TTTCCTAGTG AGCCATAA
 
Protein sequence
MTITAYSKTF KRELDARQLK NLFDENNADS ALSFRDFVKA DIECPACNVS GGHYVAEAKS 
QSKGNVVKQA HFAFRDSQGK DTHLPFCDFY TGSDKLNVVS NDGRVDFMRS GSEATQLIGL 
MVCAGIEANI FTQQDIRNMR QWFLDLREQG SFIFNLNPHI VQIARASLIR NKRNRDQYIV 
DISETKNSWF DIDNEVYQSL YFKFPELALD HRDNPELWGI RLKGVVTKAK SIIVKDSGTS 
TFDRSILSEK YQLATQIASL VRSTHPRLRV LLGYTTNALR SSNPLMAFAA LLLFVSDWDV 
TVAEKKIKAI LAVETVTDIT AGNVVGMNPF IHYSAWILVK ALHELQSELG YEVDFDAEFN 
FEKERLMKLY FPSEP