Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_B0076 |
Symbol | traX |
ID | 6870927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011204 |
Strand | - |
Start bp | 38586 |
End bp | 39326 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642783216 |
Product | conjugal transfer pilus acetylation protein TraX |
Protein accession | YP_002213910 |
Protein GI | 198241638 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02755] type-F conjugative transfer system pilin acetylase TraX |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 99 |
Fosmid unclonability p-value | 0.941243 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATGG ATAACGCCAC ACGTAACGAT TCGCGGGCAG CCCAGGTGGA TACCCGGCTG CAGCGACTGC TGGCCTGGTC GCCTGGACAG AGGGATCTCA TCAAAACCGT GGTGCTGCTG CTGATGGTGG CTGACCATAT TAACCGTATC CTGCACCTGG ATCTGACGTG GCTGTTTCTG GCCGGGCGCG GGGCGTTTCC GCTGTTTGCC CTGGTGTGGG GGCTGAACCT GTCCCGGCAT ACGTATATCC GCCAGTCTGC GATTAACCGG CTGTGGGGAT GGGCGGTTAT CGCACAGTCC GGATATTTTC TGGCGGGATT TCCGTGGTAT GAAGGGAATA TTCTGTTTGC CTTTGCGGTG GCCGCGCAGG CGCTGAAGTG GTGTGAGCTG CGCTGCCTGT TTCACTCTGC GGCCGCGCTG TTACTGCTGA CGGCGTGGAT ACCCCTGTCC GGAACCAGCT ACGGCGTTGC CGGCGTGCTG GTGCTGGTCA TCTGTTACCG GCTGTACCGG ACCGCAGATA CTGAAGAACA TCTGGCGCTT GCGGCCTGCC TGGTGGTGGC CGTCCCCGCG CTGAATCTGG TCACCAGTGA TGCCGCGGCG GTGGCAGGAC TTCTGGTGAC CGGGCTGACG GTATGGCTTG TTTCGCTGAC AGGCAAATCA CGGCCCCGGT TCTGGCCGAC TGATTTTTTC CCGGTATTCT ACACCTGCCA TCTGGCTGCC CTGGGCATTC TGGCACTGTA G
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Protein sequence | MTMDNATRND SRAAQVDTRL QRLLAWSPGQ RDLIKTVVLL LMVADHINRI LHLDLTWLFL AGRGAFPLFA LVWGLNLSRH TYIRQSAINR LWGWAVIAQS GYFLAGFPWY EGNILFAFAV AAQALKWCEL RCLFHSAAAL LLLTAWIPLS GTSYGVAGVL VLVICYRLYR TADTEEHLAL AACLVVAVPA LNLVTSDAAA VAGLLVTGLT VWLVSLTGKS RPRFWPTDFF PVFYTCHLAA LGILAL
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