Gene SeD_B0076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_B0076 
SymboltraX 
ID6870927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011204 
Strand
Start bp38586 
End bp39326 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content61% 
IMG OID642783216 
Productconjugal transfer pilus acetylation protein TraX 
Protein accessionYP_002213910 
Protein GI198241638 
COG category 
COG ID 
TIGRFAM ID[TIGR02755] type-F conjugative transfer system pilin acetylase TraX 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones99 
Fosmid unclonability p-value0.941243 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGG ATAACGCCAC ACGTAACGAT TCGCGGGCAG CCCAGGTGGA TACCCGGCTG 
CAGCGACTGC TGGCCTGGTC GCCTGGACAG AGGGATCTCA TCAAAACCGT GGTGCTGCTG
CTGATGGTGG CTGACCATAT TAACCGTATC CTGCACCTGG ATCTGACGTG GCTGTTTCTG
GCCGGGCGCG GGGCGTTTCC GCTGTTTGCC CTGGTGTGGG GGCTGAACCT GTCCCGGCAT
ACGTATATCC GCCAGTCTGC GATTAACCGG CTGTGGGGAT GGGCGGTTAT CGCACAGTCC
GGATATTTTC TGGCGGGATT TCCGTGGTAT GAAGGGAATA TTCTGTTTGC CTTTGCGGTG
GCCGCGCAGG CGCTGAAGTG GTGTGAGCTG CGCTGCCTGT TTCACTCTGC GGCCGCGCTG
TTACTGCTGA CGGCGTGGAT ACCCCTGTCC GGAACCAGCT ACGGCGTTGC CGGCGTGCTG
GTGCTGGTCA TCTGTTACCG GCTGTACCGG ACCGCAGATA CTGAAGAACA TCTGGCGCTT
GCGGCCTGCC TGGTGGTGGC CGTCCCCGCG CTGAATCTGG TCACCAGTGA TGCCGCGGCG
GTGGCAGGAC TTCTGGTGAC CGGGCTGACG GTATGGCTTG TTTCGCTGAC AGGCAAATCA
CGGCCCCGGT TCTGGCCGAC TGATTTTTTC CCGGTATTCT ACACCTGCCA TCTGGCTGCC
CTGGGCATTC TGGCACTGTA G
 
Protein sequence
MTMDNATRND SRAAQVDTRL QRLLAWSPGQ RDLIKTVVLL LMVADHINRI LHLDLTWLFL 
AGRGAFPLFA LVWGLNLSRH TYIRQSAINR LWGWAVIAQS GYFLAGFPWY EGNILFAFAV
AAQALKWCEL RCLFHSAAAL LLLTAWIPLS GTSYGVAGVL VLVICYRLYR TADTEEHLAL
AACLVVAVPA LNLVTSDAAA VAGLLVTGLT VWLVSLTGKS RPRFWPTDFF PVFYTCHLAA
LGILAL