Gene SeD_B0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_B0058 
Symbol 
ID6870868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011204 
Strand
Start bp32325 
End bp33119 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content44% 
IMG OID642783206 
Producthypothetical protein 
Protein accessionYP_002213900 
Protein GI198241709 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00740198 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones104 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGCC TGATATCAGC CTTCTGTATT ACATTCTGTT GTCATGCTTA CGCTATAACC 
CTAGATGCCA GTATTACTGA TTTTACGGTA CTATTTGGGC AACATATGGG GCACAGTGCT
TGTGTAGGCA AATTTCCACA AGGTGCTCCA CCCAGTACTT TTGTAGGATG CCGATCGAAT
GGTGATTTTT CAATGTATAA TTCATTTACC TCAAAAGTCA TCATTACTCG GTTGCCCGAC
AAAGTATCCG CTGCACATGG TGAGAGTCTG CCATGTACAG TTCCCTCGTT GAGGGTCCGG
GGAGGGTTAG AATTCGCTAA GTCAACCTCC GATGCAGGAA TAGTCGAAAC TATTGATATT
AGTGGAATGA ATGTAGGTGA AAGCCGGACA GGGGATATTA AAAATGCCAA ATATATTGCC
CTTACGCCCG GAACTGTTAT CAGCCTAGAG GCGCTTCAGT GTGATTACAG TGCTGGTTCG
CTTTTTGGCG ATACATCTGC TCGAGTCTCT GCTAATTATT CAATAGAAAT GCCTGATAGT
AATTTCAGCA CCTCGGTACT ATATGAGGTA CTGGCTAAAA TTGACAAAAT TGGGAGCAAA
CCCGACTTTA CTTTGTCACC GACTTATGTC AGGTGTGTAG GTAACACTGC GTCCGGGTGC
ATGACTGAAC CTGTGACAGT AAGCGTAAAA GATGTAACTA ATGGTCACAG AATTCAAGTC
ACTGGTCTGG TAACTGGAGG GATTTATCAT ATATATCAAA TACTGGCCGT GTCGACCTGC
CCGAGGGTAA GTTGA
 
Protein sequence
MNRLISAFCI TFCCHAYAIT LDASITDFTV LFGQHMGHSA CVGKFPQGAP PSTFVGCRSN 
GDFSMYNSFT SKVIITRLPD KVSAAHGESL PCTVPSLRVR GGLEFAKSTS DAGIVETIDI
SGMNVGESRT GDIKNAKYIA LTPGTVISLE ALQCDYSAGS LFGDTSARVS ANYSIEMPDS
NFSTSVLYEV LAKIDKIGSK PDFTLSPTYV RCVGNTASGC MTEPVTVSVK DVTNGHRIQV
TGLVTGGIYH IYQILAVSTC PRVS