Gene SeD_B0057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_B0057 
Symbol 
ID6870892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011204 
Strand+ 
Start bp31630 
End bp32289 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content43% 
IMG OID642783205 
Producthypothetical protein 
Protein accessionYP_002213899 
Protein GI198241676 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0267858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones104 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACAA ATAAGCAAGG CTGTTCATCA AGTAATAAAA ATCCGGTGCT TGGTGTATCT 
GTAGCCGAAA TAAAGGATAT TGTCTGTGTT ATGTCGTTCG GCGATGTCCG TCTGGGAGCA 
TTAACCGTTA TGCGATTCAA TAAAATTAAG AACGCCGCAA TAACTATTGG GTTTGCCCTG 
TTCGGGCTGA CTTCATCAGT ACATGCTGCT GATCCTGCAA CAGCCTCGCT AATTATAGAA 
GCTATATTAA CAAAACCAAC TTGCATGATT ACTGTTCCAA CCACTTATGA TTTGGGGCAG 
TTGATTCGTG GGCAAGTCAG AGAGCATGAA CCATTACTTA TTAATGTCAA TTGCCCTGGA 
AAAGACTCAC TGAAAACGGC GCTAAAGGCT AAGGTTCTAG CGGGAAGGTT AGAAGGAGAT 
GATAAAGTGC AGATGCTAGT AAATGGCCAA GGTAATGGTA CATTGTTATC ATTAAAGCCT 
GTGAATGAAT CTGGAGCAAG TTCTCCTGTT AAACTTACAG GAGCGGCATC AGGTACTTTT 
TGCGAAGTTG ATACTGTTGG ATATCGCCAG TGTCAGCTAA TTCCTGTTAC GGAGGTTCAC 
TCAGAGGATA CGCCGGGGCA TGCTTCGGCA ACATTATTGT TTGAGGTAGT TTATCCGTAA
 
Protein sequence
MKTNKQGCSS SNKNPVLGVS VAEIKDIVCV MSFGDVRLGA LTVMRFNKIK NAAITIGFAL 
FGLTSSVHAA DPATASLIIE AILTKPTCMI TVPTTYDLGQ LIRGQVREHE PLLINVNCPG 
KDSLKTALKA KVLAGRLEGD DKVQMLVNGQ GNGTLLSLKP VNESGASSPV KLTGAASGTF 
CEVDTVGYRQ CQLIPVTEVH SEDTPGHASA TLLFEVVYP